Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00458 ATGGGCTTCTCAGAAAACAACTGGGTTCTTCTTGTTTTCTTCATGGTGTCAAGCTTTTGGGGGTCTTCAATGGCAGACCCACGGACGAATATTGCTGGTTTCTTCTGCAATACAACTGTAGCTGTTTCTGGTTCTGTTCTTGCTCAAAACTTTGTTCCTGCTATGGATAATCTGAGCACTCTGGTTAATCAAAATGGGTTCGGGACCACTGTCGTTGGAGAAGGCCCAAATGCTGTTTTCGGGCTTGCTCAGTGCTTCAAAGACCTTAGTTCTATCGACTGTAGGCTCTGCTTCTCAGAAATTCGATCAATTCTCCCAAAATGCTATCCTGAAACTGGAGGAAGGATTTTTCTAGATGGGTGTTTTGGGAGATATGAGAATTTCTCATTCTTCAATCAAGCCGTAGTTTCGGAGGACTCAAAAAAATGTTCTTTAGATAAGAACAGTTCTCATCCTGATGAATTTAGGGAAGTTGTCAAAATGGTTATTGGGAATGTGAGCTCAGAAGCTCAAAGGACTCAGGGGTTTGCTGTGGGATCCGTTTCAAGCTACAATTTGACTGTATATGCTCTTGCTCAATGTTGGGAGAACTTGGAAAAGGGGGTCTGTAATTCTTGCCTCCAAGCTGCTGCTTCTTCAATCATTTCATGTTCTCCGGCTGTTGAAGGTCGGTCGCTTAATGCTGGCTGTTATATGAGGTATTCAACCGGGATTTTCTGGAACTCAAACCAGACCGATCGAAATTCCTCAGGTAAAGGTAAGAGGTTATGGATTATACTGGGTTCTGCTCTTGGTGGTTTTCTACTGATAATTGGGATTGGGATTTGGAAAGCAAAATACATGAGCAAATCGAATTTCAAATCTCTAAGTGATTTATATGGATCTGGATTGTCCACTGCCATTTCTCAGTCCAAGCTAAATATTAGATACCTGGTATTGAAAAAGGCTACCAGAAATTTTGATTCATCAAACAAGCTTGGACAAGGCAGCTATGGGACTGTCTACAAGGGTGTTCTTCCCGATGGAAGAGAAGTTGCGGTAAAGAGATTGTTTCTCAATACAAGACAGTGGGTAGATCAGTTCTTCAATGAAGTGGATTTGATCAATAAGGTACGCCACAAAAATCTTGTAAAGTTGCTTGGTTGCAGTGTTGATGGCCCTGAAAGCCTGCTTGTTTATGAATACTACTTCAACAAGAGCCTGGATCAGTTTATCTTCGATGTCAATCAAGAAAAACATTTGGACTGGCAGAAAAGGTTTGATATCATCCAAGGGGTGGCCGAAGGGCTCTCCTACCTCCACGAGGAGTCTGAAATCCGAATAATCCATAGAGACATCAAAGCAAGTAACATTCTCTTAGATGATAAACTCAAGCCCAAGATAACAGATTTTGGCCTTGCGAGGTCTTTTGCAGAGGACCAAACGCATCTTAGCACCGGAATAGCAGGAACTCTGGGATACATGGCTCCTGAATATGTTGTCCATGGACATTTGACCGAGAAGGCAGATGTATACAGCTTTGGTGTGTTGATTCTTGAAATTGTGACCGGACAAAGGTGCAGCAACGGGGTGGGAACACAGGCAGGGCAATTTTTCTTAGCAAAGATATGGAACCATTACAAGGATAACACAGTAGACGAAATTATAGATCGAAGTTTCTATGATGAGGAGGTGAAGGATGAGATCTTGCATGTGGTGCATGTGGGACTATTGTGCACACAAGCGACACCAAGTCATCGGCCTACAATGGCAAAGGTAGTGGAATTAATGAGAAGCAGCAGGGATCATGTGGACCTTTTACCCAGTGACCCACCATTTTTAGATGTTTTAGCAATGGAAAGCCAGGAAGAAGGTGAAGGTTCACATTTGCTATCCATGGCATCTGCTCCAAGTTTTTCAGCATCATCAGACTGTCAAATAGATGGGAGATGA 1932 0.4275 MGFSENNWVLLVFFMVSSFWGSSMADPRTNIAGFFCNTTVAVSGSVLAQNFVPAMDNLSTLVNQNGFGTTVVGEGPNAVFGLAQCFKDLSSIDCRLCFSEIRSILPKCYPETGGRIFLDGCFGRYENFSFFNQAVVSEDSKKCSLDKNSSHPDEFREVVKMVIGNVSSEAQRTQGFAVGSVSSYNLTVYALAQCWENLEKGVCNSCLQAAASSIISCSPAVEGRSLNAGCYMRYSTGIFWNSNQTDRNSSGKGKRLWIILGSALGGFLLIIGIGIWKAKYMSKSNFKSLSDLYGSGLSTAISQSKLNIRYLVLKKATRNFDSSNKLGQGSYGTVYKGVLPDGREVAVKRLFLNTRQWVDQFFNEVDLINKVRHKNLVKLLGCSVDGPESLLVYEYYFNKSLDQFIFDVNQEKHLDWQKRFDIIQGVAEGLSYLHEESEIRIIHRDIKASNILLDDKLKPKITDFGLARSFAEDQTHLSTGIAGTLGYMAPEYVVHGHLTEKADVYSFGVLILEIVTGQRCSNGVGTQAGQFFLAKIWNHYKDNTVDEIIDRSFYDEEVKDEILHVVHVGLLCTQATPSHRPTMAKVVELMRSSRDHVDLLPSDPPFLDVLAMESQEEGEGSHLLSMASAPSFSASSDCQIDGR* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00458 643 SUPERFAMILY Protein kinase-like (PK-like) 307 608 IPR011009 -
Eupl11g00458 643 Gene3D Transferase(Phosphotransferase) domain 1 397 599 - -
Eupl11g00458 643 FunFam Cysteine-rich receptor-like protein kinase 2 396 598 - -
Eupl11g00458 643 FunFam Cysteine-rich receptor-like protein kinase 3 139 239 - -
Eupl11g00458 643 Gene3D - 29 130 IPR038408 -
Eupl11g00458 643 Gene3D - 138 239 IPR038408 -
Eupl11g00458 643 ProSiteProfiles Protein kinase domain profile. 320 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00458 643 Pfam Salt stress response/antifungal 49 127 IPR002902 -
Eupl11g00458 643 Pfam Salt stress response/antifungal 143 236 IPR002902 -
Eupl11g00458 643 SMART serkin_6 320 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00458 643 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Eupl11g00458 643 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 82 616 - -
Eupl11g00458 643 CDD STKc_IRAK 326 590 - -
Eupl11g00458 643 FunFam Putative DUF26-domain receptor-like protein kinase family protein 294 395 - -
Eupl11g00458 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Eupl11g00458 643 Pfam Protein kinase domain 322 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00458 643 Gene3D Phosphorylase Kinase; domain 1 287 395 - -
Eupl11g00458 643 ProSiteProfiles Gnk2-homologous domain profile. 29 130 IPR002902 -
Eupl11g00458 643 ProSiteProfiles Gnk2-homologous domain profile. 137 239 IPR002902 -
Eupl11g00458 643 FunFam Cysteine-rich receptor-like protein kinase 2 29 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00458 Eupl-Chr11 5747267 5752613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00458 11 620 Receptor kinase-like Gene Family AT1G70520 46.055 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl11g00458 Pkinase 2.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00458 - - ming:122078849 981.859