Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00451 ATGGGCGTAAACATAGGAGGGCAAATAGAGAAAGTTGATGGAAAAAAACTGAGTTACAAAGAATTTGTGGAGAGATATCTTGAGAAGAACCAACCCGTTGTTCTAACAGGGCTGATGGATGGATGGAGGGCTTGCAGTGATTGGGTCACTGAGAATGGACAACCCAATCTCCATTTCTTCTCTGCCCATTTCGGGAAATCCAAAGTTCAGGTTGCAGAGTGTAGCCAAAGAGAGTTTACAGATCAGAAGCGAGTCGAAATGTCTGTCTCAGAGTTCATCGACCACTGGCTTGAGCATTCCAGTCGCGAGGACAATGGACAGTCCTTGCTATATATGAAGGACTGGCACTTTGTAAAGGAGTACCCCGAATATGTAATGTACACAACTCCACTATTTTTTCGTGATGATTGGCTCAACCTATATCTCGACAGTCATCGTATGCATAAGGATCCTGACACTTACCAAGAGAAAAATGAAATAAATTGCTCCGACTATCGTTTTGTTTACATGGGAGCAAAAGGTACATGGACTCCTCTTCACGCTGATGTTTTCAGGTCATATAGCTGGTCAGCAAACATATGTGGGAAGAAACAATGGCTTTTTCTATCTCCTGCCCAATGTCACCTTGTGTTTGACAGGAACATGAAAAGCTCTGTCTATGACATTTTTGATGATGTTTCCGAAACAAAGTTTCCAGGCTTTAAGAAGGCTATTTGGTTGGAATGCAGTCAAGAGAAAAACGAAATTATCTTTGTACCTAGTGGATGGTATCATCAAGTTCATAATGTGGAAGCTACAATATCCATAAACCACAACTGGTTCAATGCCTATAACCTTTCTTGGGTGTGGAAATTACTAATCAAAGATTATAACGAGGCAAAGGAGTATATAGAGGACATCAGAGACATATGTGATGATTTTGAAGGTCTTTGTCAGCGGAATCTTGCAGCCAACACAGGCATGAACTTTTTCGATTTCTTCGTCTTCATCACACGCTTCTCTTTTGCCAACTTGATCCAACTGTACTTTCTCGCCAAAAGCTATGAAAATCCCATCTGGGGTTCATCCCCGAAAGCTCGCCATCTTATTTCTAACCTTTTATCTATACGCAACATTGCCTTGAACATGAAAACCATAGAGGGGTTGACAGGAAATCATAGTGCCTTATTGGATTTCAGAGAAATATATGAGGAGCCTGAGTTCTTGGAGCTGTGCATGGCTTTGGATGGAATATATCAAAGGATAGATGAACAATGGAAACAAAGTTACAATATAAGCAAACCTTTGAGAGTTGATTTTGGGGACTTGGATTTCATAGAAGCTTCTTGTTCTAAGGTCTCTAGTCCTCAAGATCTAATAAGAGTAACGGACTATGCTGTTAAAAGTCTTGGTACCAAATCTTGTGGTGGGAACTTTAGACTGTTATCTGAATTGGATGAACTTGGAACCTCATCTGTTCTGTGA 1464 0.4071 MGVNIGGQIEKVDGKKLSYKEFVERYLEKNQPVVLTGLMDGWRACSDWVTENGQPNLHFFSAHFGKSKVQVAECSQREFTDQKRVEMSVSEFIDHWLEHSSREDNGQSLLYMKDWHFVKEYPEYVMYTTPLFFRDDWLNLYLDSHRMHKDPDTYQEKNEINCSDYRFVYMGAKGTWTPLHADVFRSYSWSANICGKKQWLFLSPAQCHLVFDRNMKSSVYDIFDDVSETKFPGFKKAIWLECSQEKNEIIFVPSGWYHQVHNVEATISINHNWFNAYNLSWVWKLLIKDYNEAKEYIEDIRDICDDFEGLCQRNLAANTGMNFFDFFVFITRFSFANLIQLYFLAKSYENPIWGSSPKARHLISNLLSIRNIALNMKTIEGLTGNHSALLDFREIYEEPEFLELCMALDGIYQRIDEQWKQSYNISKPLRVDFGDLDFIEASCSKVSSPQDLIRVTDYAVKSLGTKSCGGNFRLLSELDELGTSSVL* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00451 487 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 11 322 - -
Eupl11g00451 487 ProSiteProfiles JmjC domain profile. 118 290 IPR003347 -
Eupl11g00451 487 Gene3D Cupin 3 274 - -
Eupl11g00451 487 SMART cupin_9 110 290 IPR003347 -
Eupl11g00451 487 Pfam Cupin-like domain 21 273 IPR041667 -
Eupl11g00451 487 SUPERFAMILY Clavaminate synthase-like 7 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00451 Eupl-Chr11 5620006 5628343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00451 7 282 Glycosyltransferase AT1G78280 22.535 1.33e-18 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Eupl11g00451 Cupin_8 1.2e-24 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00451 - - ming:122079349 722.62