Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00449 ATGCCTGTTAATCCATGGATCATCTTCCCTTTCCTCCTCTTCCTTTCTGTAACAATTTCTCTGCCTTTCATGGCTTTTGCCGTAAACGAGCAAGGTGAAGCTCTGTTATCATGGAAGAGGAGCTTGAATGGCTCATTCGAGGTCTTGAACGACTGGGATCCAAGTGATGAAAACCCGTGTGCTTGGTTCGGGATCTTCTGCAACTTCAACAAGGAAGTAGTAGAATTGAGCTTGAGGTATGTTGATTTACTGGGCCATGTTCCTTCTAATTTAAGCTCATTGAAGTCGTTAAACAAGCTCGTCTTGTCAGGAACGAATCTCACTGGTTCGATTCCTAAAGAGATAGGCAGTCTTGGTGAATTGATTCATTTAGATTTGGGTGATAATGCTCTCACCGGTGAAATCCCGAGCGAGATTTGCAGCTTGATTAAGCTCCAAGGGCTCTACCTCAATTCGAATCGGCTTGAAGGGTCAATTCCAATCGAGATAGGGAACCTTTCGAGCTTGACGTGGTTGATTCTATATGATAATCAAATCAGTGGTGGAATCCCTAGTACTATAGGGAGTTTGAAGAAACTAGAAATTTTCAGAGCTGGTGGTAACAAGAACATTGAAGGTCCTTTACCTCAAGAGATTGGGAATTGCAGCAATTTGGTCATGTTAGGCCTTGCGGAGACAAGTATCTCAGGGTTCCTACCTTCTAGTCTGGGTTTACTTAAGAAGCTTCAAACGTTGGCGATCTACACCGCTCTCCTCTCTGGCCAAATCCCTCCGGAGCTTGGCGAATGTACTGAGTTACAAAGCTTATACTTGTATGAGAACTCGCTCACCGGCTCAATTCCAACTCGATTGGGGAATCTTCGCAATCTCCAAAACATACTCCTTTGGCAAAACAATTTAGTCGGCGTCATCCCTCCGGAGCTTGGTAATTGCAAGGAGTTGATGCTGATCGATGTATCGATGAATTCAATCACCGGGAGTATTCCGCCAACATTTGGGAATTTGAGCTCATTACTAGAGCTACAATTGAGTGTGAATCAAATCTCGGGTCGGATTCCATCAGAACTCGCAAATTGTCAAGGTCTCACTCATATTCAGCTCGATAACAATCAAATCACAGGTACGATTCCTTCGGAATTTGGACGGCTTGGGAATCTGACATTGTTGTTCTTGTGGCAAAACAAGCTTGAGGGGAATATACCGCCATCGATTTCACTCTGCCGGAGCCTAGAAGCGATTGATTTATCTCAAAACAGTCTAATCGGCTCGATTCCGAAGGGTGTTTTTGAGTTGCAGAATCTCAACAAGCTGCTGCTTCTATCAAACAATCTTTCAGGTGAAATCCCACCAGAGATTGGGAAATGCACGTCGTTGATCCGATTCAGAGCCAGCGACAACAAGATCGCCGGAGCAATTCCGCCAGAGATCGGGAATCTACGCAATTTGAATTTCTTAGATCTTGGATCGAACAGATTGACCGGGAATATACCGCCTGAGATATCTGGCTGCCGGAATCTGACGTTCCTAGACTTACATTCCAATGCAATCACGGGAAGTCTGCCGGAGAATTTCAACCAGCTCGTTTCCCTCCAATATGTTGACGTATCTGATAATATGATCGGAGGGACGTTGAGTCCGAGACTCGGATCGCTGAGTTCACTCACCAAACTCGTCCTCGGTAAAAACCGGTTTTCCGGTCCGATACCGTCGCAACTTGGCTCTTGCACAAAACTTCAGTTACTGGATCTGGGCGGGAACGGGCTCTCAGGGGAGATCCCGGCGAGTGTGGGTAAGATTCCAGCGCTCGAGATCGCTTTAAATCTTAGCTGGAACAAACTTTCAGGCGAGATTCCGGTGGAGTTTTCAAGCTTGGATAAGCTCGGAATTCTTGATCTCTCCCACAACCAGCTATCGGGGGACCTCCATATTCTCGCTGGGCTTCAAAATCTCGTGGTTCTCAATATCTCTAACAACAATTTCTCAGGGCGTGTACCGTACACCCCTTTCTTCACAAAGCTTCCATTAAGCGACCTCGCCGGGAACCCCTCTCTATGCTTCTCCGGCAACCACTGCGCCACAGATACTCGCGGTGGCGCCACAGGACACGCCGCGGCGGCCAGGGTCGCAATGGTGGTGCTACTGTGCGTCGCGTGTGCACTCCTCTTGGCGGCTCTCTTTATCATCGTACGAGAGAGGAGGAGGCGGCGTAGCTTCGGTGGGGCCCAAGAATGTGATGGTGATGATGACGTGGAGATGGGCCCACCGTGGGAGGTGACTCTATACCAGAAACTCGACTTGTCTATTACTGACGTGGCGAGGTATTTGACAGCTGGCAACATCCTAGGGAAGGGACGATCGGGGATCGTTTACAAGGCGAATATTCCATCAGGCTTAACCATCGCTGTTAAGAGATTCCGGTCGTCGGAGAAGTTCTCAGCGTCTGCGTTCTCGTCGGAGATTGCCACGTTGGCACGGATACGGCACAGGAATATCGTGCGCTTGTTGGGTTGGGGCGCCAACAGAAAGACAAAACTACTTTTCTACGATTATTTGGTGAACGGAACATTGGGCGCACGCTTGCACGATGAGTGCGCAGGATTAGTAGAGTGGGAGACGCGCTTCAACATTGCACTGGGGGTCGCGGAAGGGCTCTCTTACTTGCACCACGACTGCGTTCCCGCAATCCTGCACCGGGATGTGAAGTCGCATAACATACTGTTGGGGGAGCGATACGAGGCTTGCTTGGCTGACTTTGGGCTCGCTAGACTAGTCGAAGATGAGAACGGCTCGTTTTCGGCGAGCCCGCAGTTTGCTGGGTCCTACGGCTACATGGCGCCTGAGTATGCTTGCATGTTAAAAATCACGGAGAAGAGTGACGTCTACAGCTACGGTGTAGTCCTCCTAGAAATCATAACTGGAAAGAAACCAGTTGATCCTTCATTCCCCGACGGCCAACACATAGTTCAGTGGGTCCGTGACCATCTAAAGAGCAAGAGGGACCCAGTTAAGATCATCGATCCCAAGCTCCAGGGACGACCCGACTCCCAAATACAAGAGATGCTTCAAGCTCTAGGGATCTCCCTCCTCTGCGCCAGCAACCGCGCGGAAGACCGGCCAACAATGAAAGATGTAGCAGCACTACTAAGAGAGATCCGACATGAAACCCCAGCAGGAAGCGAAGCCTACAAGCCCAACAATAAGATGTTGGAGACACCCTCATCTTTATCTCATGCTCAGCTACTTCTTCAGGGATCTTCCCACTGCTCACTAGCCTACTCATCTTCATCAGATGGGGTCTCTCAATGA 3306 0.4909 MPVNPWIIFPFLLFLSVTISLPFMAFAVNEQGEALLSWKRSLNGSFEVLNDWDPSDENPCAWFGIFCNFNKEVVELSLRYVDLLGHVPSNLSSLKSLNKLVLSGTNLTGSIPKEIGSLGELIHLDLGDNALTGEIPSEICSLIKLQGLYLNSNRLEGSIPIEIGNLSSLTWLILYDNQISGGIPSTIGSLKKLEIFRAGGNKNIEGPLPQEIGNCSNLVMLGLAETSISGFLPSSLGLLKKLQTLAIYTALLSGQIPPELGECTELQSLYLYENSLTGSIPTRLGNLRNLQNILLWQNNLVGVIPPELGNCKELMLIDVSMNSITGSIPPTFGNLSSLLELQLSVNQISGRIPSELANCQGLTHIQLDNNQITGTIPSEFGRLGNLTLLFLWQNKLEGNIPPSISLCRSLEAIDLSQNSLIGSIPKGVFELQNLNKLLLLSNNLSGEIPPEIGKCTSLIRFRASDNKIAGAIPPEIGNLRNLNFLDLGSNRLTGNIPPEISGCRNLTFLDLHSNAITGSLPENFNQLVSLQYVDVSDNMIGGTLSPRLGSLSSLTKLVLGKNRFSGPIPSQLGSCTKLQLLDLGGNGLSGEIPASVGKIPALEIALNLSWNKLSGEIPVEFSSLDKLGILDLSHNQLSGDLHILAGLQNLVVLNISNNNFSGRVPYTPFFTKLPLSDLAGNPSLCFSGNHCATDTRGGATGHAAAARVAMVVLLCVACALLLAALFIIVRERRRRRSFGGAQECDGDDDVEMGPPWEVTLYQKLDLSITDVARYLTAGNILGKGRSGIVYKANIPSGLTIAVKRFRSSEKFSASAFSSEIATLARIRHRNIVRLLGWGANRKTKLLFYDYLVNGTLGARLHDECAGLVEWETRFNIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYEACLADFGLARLVEDENGSFSASPQFAGSYGYMAPEYACMLKITEKSDVYSYGVVLLEIITGKKPVDPSFPDGQHIVQWVRDHLKSKRDPVKIIDPKLQGRPDSQIQEMLQALGISLLCASNRAEDRPTMKDVAALLREIRHETPAGSEAYKPNNKMLETPSSLSHAQLLLQGSSHCSLAYSSSSDGVSQ* 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00449 1101 SUPERFAMILY L domain-like 53 376 - -
Eupl11g00449 1101 Gene3D Ribonuclease Inhibitor 201 433 IPR032675 -
Eupl11g00449 1101 Gene3D Ribonuclease Inhibitor 434 693 IPR032675 -
Eupl11g00449 1101 ProSiteProfiles Protein kinase domain profile. 775 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00449 1101 SMART LRR_typ_2 504 527 IPR003591 -
Eupl11g00449 1101 SMART LRR_typ_2 383 407 IPR003591 -
Eupl11g00449 1101 SMART LRR_typ_2 335 359 IPR003591 -
Eupl11g00449 1101 SMART LRR_typ_2 624 648 IPR003591 -
Eupl11g00449 1101 SMART LRR_typ_2 287 311 IPR003591 -
Eupl11g00449 1101 SMART LRR_typ_2 431 455 IPR003591 -
Eupl11g00449 1101 SMART LRR_typ_2 118 142 IPR003591 -
Eupl11g00449 1101 SMART LRR_typ_2 479 503 IPR003591 -
Eupl11g00449 1101 SMART LRR_typ_2 551 575 IPR003591 -
Eupl11g00449 1101 SMART LRR_typ_2 166 190 IPR003591 -
Eupl11g00449 1101 FunFam Putative LRR receptor-like serine/threonine-protein kinase 605 690 - -
Eupl11g00449 1101 ProSitePatterns Serine/Threonine protein kinases active-site signature. 895 907 IPR008271 GO:0004672|GO:0006468
Eupl11g00449 1101 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 851 1066 - -
Eupl11g00449 1101 Gene3D Transferase(Phosphotransferase) domain 1 851 1071 - -
Eupl11g00449 1101 Pfam Protein kinase domain 778 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00449 1101 Gene3D Phosphorylase Kinase; domain 1 761 850 - -
Eupl11g00449 1101 ProSitePatterns Protein kinases ATP-binding region signature. 781 803 IPR017441 GO:0005524
Eupl11g00449 1101 Gene3D Ribonuclease Inhibitor 27 200 IPR032675 -
Eupl11g00449 1101 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Eupl11g00449 1101 PANTHER UNNAMED PRODUCT 266 978 - -
Eupl11g00449 1101 SMART serkin_6 775 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00449 1101 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 202 425 - -
Eupl11g00449 1101 ProSiteProfiles Leucine-rich repeat profile. 626 648 IPR001611 GO:0005515
Eupl11g00449 1101 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 516 592 - -
Eupl11g00449 1101 SUPERFAMILY Protein kinase-like (PK-like) 765 1048 IPR011009 -
Eupl11g00449 1101 Pfam Leucine rich repeat 480 540 IPR001611 GO:0005515
Eupl11g00449 1101 Pfam Leucine rich repeat 313 372 IPR001611 GO:0005515
Eupl11g00449 1101 SUPERFAMILY RNI-like 295 659 - -
Eupl11g00449 1101 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 28 201 - -
Eupl11g00449 1101 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 426 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00449 Eupl-Chr11 5594647 5598725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00449 1 1096 Receptor kinase-like Gene Family AT5G56040 55.407 0.0 1167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl11g00449 Pkinase 6.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00449 - - nnu:104591449 1725.29