Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00436 ATGGCTCCCCAAAATCTTCTTCTCCTCTTTCCCCTTCTCACAACCCTCTTCACTAGAACTCTCTCCAGTATCTCCATCAAGTCTAGTCTTATGTACCCTTTTACATGCTATGAGCACATCAATACATGTAATTCCTACTTGTACCACATCTCCAAAGGCCTCGCAATAGAACAGATTGCTTCTTTTTACTCTGTTAACACATCCCAAATCAAAAACATAACCTATGGCACCAAACAAGACTACCTTATATCAGTCCCTTGTGGCTGTAAGAATGTCGAAGGCACTGTCGGGTACTTTTATGACACCTCCTATAGTGTCCAACTGGGTGACACCTTTGTGAATGTTACGGACAAGATTTATAGTGGGCAAGCTTGGATGGTTGGAGGAGAAGATACCCGTTTTGTTGCAGGGACTCCGTTTCCTATACATCTTTTATGTGGGTGTTTGCAAGGAGATTCTCAAGTAGCGGTAACATACACAGTTCAAGAACATGATACTTTATCAGGGATTGCTAATTTATTATCGGCTCATTTGGGAGGCATTGAGAGCTTGAATGGGAGAGTGACTCAAAATCCTGGATTTATTGATGTTGGGTGGGTGTTATTTGTGCCTATGGAGAAGTATGGAATTCAAGCCCCCAAGAAAAGAAGAAGAAGAAACAAGTGGCCAATAATCATTGGTATTTTGTCATCTGTGGCGTTAATTTCAATTGTCACATTGATAATACTCCTCAGAAGAAAGAGAAACCGTCAGCTCACTGAGGAAGATCCTAAAGTTGTTTCCGCAAGCCTCAGTAACAAGCGAACTGCTTCCATGCAGCACCAGTACAACATGGAAGACGTGACAGGATTCGAGTCAGAAAGACCTGTAATATTTAGTCTAGAGGATGTAGAAGAGGCTACAGCAAACTTCGATGAAACAAGGAAAATTGGAGAGGGTGGATACGGAAGTGTATATTTCGGTGTATTAGGAGAGCAGGAAGTCGCAATTAAGAAGATGAAGTCTAATAAATCCAAGGAGTTCTTTGCAGAACTTAAGGTGTTATGCAAGATACATCACAATAATGTGGTGGAACTGCTTGGATATGCGAGTGGAGATGACCACCTCTATTTGGTTTATGAGTATGTTCAGAATGGATCACTTAGTGACCACCTTCATGACCCGTTACTAAAAGGTCATCAGCCTATTTCTTGGATTGCAAGAGCACAAATAGCACTTGATGCCGCAAGGGGTATCGAATACATTCACGACCACACAAAGGCACGTTATGTGCACCGTGACATAAAGACAAGCAACATTCTACTTGACGAGGGACTCAGAGCAAAGGTTGCAGATTTCGGGCTGGCAAAGCTTGTGGATCGTACTAGCGAAGAAGATTTCATAGCAACACGCCTGGTTGGAACACCTGGTTACCTTCCTCCTGAGTCAGTGCGTGAGCTACAGATGACCTGTAAAAGCGATGTTTTTGCATTTGGGGTGGTTTTAGCAGAACTTATAACCGGTCAGCGTGCTCTCATTCGTGACAACCGGGAATCCAACAAGATGAAATCACTGATCGCAGTTGTGTATGCAATATTTCGGGATGAAGACCCGGAGAATGCTTTGGAAGCATTAATAGATGGTAATCTCAGGCGCAGCTATCCTATGGAGGAAGTATACAAGATGGCAGAAATTGCCGAGTGGTGTTTAAGTGAAGATGCAGTGAATCGACCAGAGATGCAAGAGGTTGTCGTGACCCTCTCTCAAATTTTGGTGTCCTCAGTGGAGTGGGAGGCCTCACTTGGAGGGGACAGCCCGGTTTTCAGTGGGTTATTTAATGGAAGATGA 1827 0.4351 MAPQNLLLLFPLLTTLFTRTLSSISIKSSLMYPFTCYEHINTCNSYLYHISKGLAIEQIASFYSVNTSQIKNITYGTKQDYLISVPCGCKNVEGTVGYFYDTSYSVQLGDTFVNVTDKIYSGQAWMVGGEDTRFVAGTPFPIHLLCGCLQGDSQVAVTYTVQEHDTLSGIANLLSAHLGGIESLNGRVTQNPGFIDVGWVLFVPMEKYGIQAPKKRRRRNKWPIIIGILSSVALISIVTLIILLRRKRNRQLTEEDPKVVSASLSNKRTASMQHQYNMEDVTGFESERPVIFSLEDVEEATANFDETRKIGEGGYGSVYFGVLGEQEVAIKKMKSNKSKEFFAELKVLCKIHHNNVVELLGYASGDDHLYLVYEYVQNGSLSDHLHDPLLKGHQPISWIARAQIALDAARGIEYIHDHTKARYVHRDIKTSNILLDEGLRAKVADFGLAKLVDRTSEEDFIATRLVGTPGYLPPESVRELQMTCKSDVFAFGVVLAELITGQRALIRDNRESNKMKSLIAVVYAIFRDEDPENALEALIDGNLRRSYPMEEVYKMAEIAEWCLSEDAVNRPEMQEVVVTLSQILVSSVEWEASLGGDSPVFSGLFNGR* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00436 608 Gene3D LysM domain 152 210 IPR036779 -
Eupl11g00436 608 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Eupl11g00436 608 SMART serkin_6 304 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00436 608 SUPERFAMILY Protein kinase-like (PK-like) 287 580 IPR011009 -
Eupl11g00436 608 FunFam Kinase family protein 280 375 - -
Eupl11g00436 608 Gene3D Phosphorylase Kinase; domain 1 283 375 - -
Eupl11g00436 608 FunFam PTI1-like tyrosine-protein kinase 3 376 594 - -
Eupl11g00436 608 Pfam LysM domain 159 204 IPR018392 -
Eupl11g00436 608 Gene3D Transferase(Phosphotransferase) domain 1 376 593 - -
Eupl11g00436 608 Pfam Protein kinase domain 305 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00436 608 ProSiteProfiles Protein kinase domain profile. 304 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00436 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Eupl11g00436 608 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 35 602 IPR044812 GO:0019199|GO:0045087
Eupl11g00436 608 SUPERFAMILY LysM domain 157 204 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00436 Eupl-Chr11 5376861 5384059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00436 284 608 Receptor kinase-like Gene Family AT1G51940 53.474 1.18e-121 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Eupl11g00436 Pkinase 4.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00436 - - msin:131228195 856.67