Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00434 ATGGCTTCTTCCAGCTCTTCCAACTCTCCTTGTGCTGCCTGCAAGTTCTTGAGGAGGAAATGCATGCCGGATTGCATCTTTGCACCATATTTCCCACCCGAAGAACCACAAAAATTTGCCAATGTTCACAAGATCTTCGGTGCAAGTAACGTTACAAAGCTCCTTAATGAGCTCCTCCCTCATCAAAGAGAAGATGCAGTAAACTCTCTTGCCTATGAAGCTGAGGCTCGGATGAAAGATCCGGTCTACGGCTGTGTTGGAGCGATCTCAGTCCTACAAAGACAAGTTCACCGGCTCCAAAAGGAACTTGACTCAGCAAACGCGGATCTGATCCGGTATGCCTTCACTGAAATCCCAACAGGATTGCCTGCATCACCAGGGGCTGGTGTCACGTCTATGGCATCTCGCCAGAGTTCCATTGATTTTGGTAGAACAAGGATGGGTAATGAAGGAGGTTCTTTCTATCAGACTTCTGGTTTGTCTCTTCCATATCCTCCTCCATGGACTGATGATTCTTCAGGAGATACCCATGAAAGAGGAGGGGAAGGCGACATGTGA 558 0.4803 MASSSSSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVHRLQKELDSANADLIRYAFTEIPTGLPASPGAGVTSMASRQSSIDFGRTRMGNEGGSFYQTSGLSLPYPPPWTDDSSGDTHERGGEGDM* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00434 185 Coils Coil 89 109 - -
Eupl11g00434 185 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Eupl11g00434 185 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Eupl11g00434 185 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 125 - -
Eupl11g00434 185 MobiDBLite consensus disorder prediction 153 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00434 Eupl-Chr11 5361189 5363030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00434 1 125 AS2 family AT5G63090 84.127 3.08e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl11g00434 LOB 1.9e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00434 - - nnu:104593118 301.982