Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00416 ATGATGGCTGGAGAAGAGAAGAGTATGGAAGAAGAGCTATCGTTCCTAGTCTTTCTAGCGGAGAGAGTCAGGAAAGCCGTGGAAGAGGCAGAGTCTTACAAGGTGGACTGCGCCGACGTGGGCAAACAAGTGGACCGTCTATCCCAAATGCTTCGCTCCGCCGCCCGCCTCAATACTTCCACCCCCTCCCTCTACGAACGCCCGTTACGCCGTATCGTCGCCGAAGTATACAAGAACTTGGAGCGTGCCCTAACCCTAGTCCGCAAGTGTAGGCGCAGCGGCGTCCTCCGCCGCGTCGTTACCATCATCTCCGCCACAGACTTCCGGAAGCTCTTGAACCTCCTCGACGCCTCCGTTGGTGACATGAAATGGCTTCTCAGCGTCTTCGACTACTCCTCCACTGACAGCGTCGGTGGTATCGTCCTCTCCCTTCCTCCCATCGCCAGCAACGACCCCATCCTCTCCTGGGTCTGGTCCTATGTAGCCTCTATTCAAATGGGTCCGTTGCCCGATCGCGGCGAGGCCGCCAACTCCCTCGCCTCTCTCGCCCTCGATAACGATCGCAACAAAAAAATTATCGTTGAAGAAGGCGGTATTCCTCCACTACTTAAGCTATTGAAGGAAGGAGCTTCTCCTGATGCCCAAATTGCCGCCGCCAATGCGCTCTCTAATTTGGCTACTGATCAGGAGAGGGTCCGGCAGATTGTGGCCGAGCTCGGTGTTCCCATCATCGTGCAGGTGCTCTCTGACGCTCCGATGAGGGTTCAAATTCGAGTTGCCATTTTGGTTTCGATGATGGCTCAGAACGACCCGGCTGCTCAAGAGGAGTTTGCGAGGGAGAACGCGATTAGGCCGCTCGTGTCTTTGCTGTCATTTGAGGCGTTCTTGGATGATCCCAAGCCTCAATCGGGTAAGACTACTAGTATTCATTCTCTTGTTCAAATTAATAAGGAATTGGGGGTGAATTCAAGTTCGATGCCTACAAAGAACTACTCTGTACATTTGAACTCTTCTTCTTCCTCTTCTTTGCATTCGGAGGGTAGTAGCCGAGGTGGACACCATAGGAAAGAGAGGGAGAATGAGAAGCCTGAGGTGAAGCTCAAGCTTAAGATTAACTGTGCTGAGGCTCTGTGGATGCTCTCCAAAGCGAGTGTGTCGAACAGCCGGAGGATTACTGAGACAAAAGGGCTGCTTTGTTTGGCAAAGCTTATCGAGAAGGAACAAGGGGAGTTGCAGCTGAATTGTTTGATGATATTGATGGAGATAGCTGCAGCGGCTGAATCCAATGCCGACCTCAGACGGGCAGCTTTCAAGACCAATTCTCCTGCTGCAAAGGCAGTTGTGGATCAGCTTCTGCGGGTGATTCAAGAGGAAAGCAATCCGTCATTGCAAATTCCCGCCATAAAAGCTATTGGGTCGTTGGCTCGCACCTTCCCAGCAAGAGAGATCCGAGTCATTAGTCCTTTAGTCACCCATCTCAGCCACATGAACCCAGATGTGGCCACCGAAGCTGCCATTTCCCTGGGGAAGTTTGCGTGTTCGGAGAATTTCCTTTGTGTGGAGCATTCAAAGGCGATCATTGAGTTTGATGGAGTCCCACCTCTGATGAAATTGCTTAGGGCCAATGAACATGCTTATTTACATGGACTGATTCTCCTCTGTTACCTGGCATTGCACGTGGACAACAATGAGGCTATAGAACGGGCAAGGGCACTGACCGCTCTTGAGGTGGCAGCTCGTTCTTCTGTGGCTCAACATCCTTCTTTGAGGGAACTGATTCCCAGGGCCATACGCAACCTTGAGCTCTATCAGGCAGGAATGCATCCTCACAGACAATCTTATGCTCCATGA 1851 0.5186 MMAGEEKSMEEELSFLVFLAERVRKAVEEAESYKVDCADVGKQVDRLSQMLRSAARLNTSTPSLYERPLRRIVAEVYKNLERALTLVRKCRRSGVLRRVVTIISATDFRKLLNLLDASVGDMKWLLSVFDYSSTDSVGGIVLSLPPIASNDPILSWVWSYVASIQMGPLPDRGEAANSLASLALDNDRNKKIIVEEGGIPPLLKLLKEGASPDAQIAAANALSNLATDQERVRQIVAELGVPIIVQVLSDAPMRVQIRVAILVSMMAQNDPAAQEEFARENAIRPLVSLLSFEAFLDDPKPQSGKTTSIHSLVQINKELGVNSSSMPTKNYSVHLNSSSSSSLHSEGSSRGGHHRKERENEKPEVKLKLKINCAEALWMLSKASVSNSRRITETKGLLCLAKLIEKEQGELQLNCLMILMEIAAAAESNADLRRAAFKTNSPAAKAVVDQLLRVIQEESNPSLQIPAIKAIGSLARTFPAREIRVISPLVTHLSHMNPDVATEAAISLGKFACSENFLCVEHSKAIIEFDGVPPLMKLLRANEHAYLHGLILLCYLALHVDNNEAIERARALTALEVAARSSVAQHPSLRELIPRAIRNLELYQAGMHPHRQSYAP* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00416 616 Gene3D - 355 610 IPR011989 -
Eupl11g00416 616 SUPERFAMILY ARM repeat 172 602 IPR016024 -
Eupl11g00416 616 PANTHER ARMADILLO REPEAT ONLY 4 7 605 - -
Eupl11g00416 616 MobiDBLite consensus disorder prediction 324 347 - -
Eupl11g00416 616 Gene3D - 7 128 IPR036537 GO:0007166
Eupl11g00416 616 SMART arm_5 270 382 IPR000225 GO:0005515
Eupl11g00416 616 SMART arm_5 185 227 IPR000225 GO:0005515
Eupl11g00416 616 SMART arm_5 519 558 IPR000225 GO:0005515
Eupl11g00416 616 SMART arm_5 228 268 IPR000225 GO:0005515
Eupl11g00416 616 SMART arm_5 440 476 IPR000225 GO:0005515
Eupl11g00416 616 MobiDBLite consensus disorder prediction 324 364 - -
Eupl11g00416 616 Pfam Armadillo/beta-catenin-like repeat 186 226 IPR000225 GO:0005515
Eupl11g00416 616 Gene3D - 165 325 IPR011989 -
Eupl11g00416 616 MobiDBLite consensus disorder prediction 348 364 - -
Eupl11g00416 616 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 197 240 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00416 Eupl-Chr11 5192141 5198149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00416 125 290 U-box Gene Family AT1G23030 28.994 4.38e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00416 - - nnu:104591480 888.641