Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00403 ATGGTAGGAAGTTCACTTGACTCCAACGACGCCTTCGTCAAAAGCAACAACAGCGTCAACACCGTTAAGTTTCTATGTAGTTACGGCGGCAAGATCCTCCCCCGTTATCCCGACGGCAAGCTACGTTACGTCGGTGGAGAGACTAGAGTCATCGCCATCGATATATCCATTCCTTTTTCAGAGCTTTTATTGAAGTTTGGAGAGTTGTGTGGATCATCAGTAAGTCTGAGGTGTCAGTTACCTACAGAAGATCTTGACTCCTTGGTTTCGATCACCTCTGATGAGGATGTCGCCTATCTCATCGAGGAGTACGATCGAGCAAGCCAAGCGGCATCGTCTCCATTAAAGATCAGAGCATTTCTTTCGCCTCCGAAGTCGATCAAAAAAATCTCCCCTCCACCATCGTACAAATCCTCCGTCGTTGATGTTGCTGCAGGAAAATACTACGCAGCCGCCGGATCTCGGACGTCGATTCATCCTGGCATGGCTGCCGATCGATGCGTCCGTCAGATCACAACACCGATACGCATATTGCGTGCCAAGTGGGCTATCGGTCCCGCGTCATTCACCCTTCTTCCTATTATCTTTCAGGGTTGTAACACAGTTCACGACTGGGTTGGAGATACGGAGGATAAAGGATATCAGGCAGGCCTCTAG 657 0.4947 MVGSSLDSNDAFVKSNNSVNTVKFLCSYGGKILPRYPDGKLRYVGGETRVIAIDISIPFSELLLKFGELCGSSVSLRCQLPTEDLDSLVSITSDEDVAYLIEEYDRASQAASSPLKIRAFLSPPKSIKKISPPPSYKSSVVDVAAGKYYAAAGSRTSIHPGMAADRCVRQITTPIRILRAKWAIGPASFTLLPIIFQGCNTVHDWVGDTEDKGYQAGL* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00403 218 CDD PB1_UP2 25 121 - -
Eupl11g00403 218 SUPERFAMILY CAD & PB1 domains 38 131 - -
Eupl11g00403 218 Gene3D - 40 121 - -
Eupl11g00403 218 PANTHER OS05G0427100 PROTEIN-RELATED 17 139 - -
Eupl11g00403 218 SMART PB1_new 36 124 IPR000270 GO:0005515
Eupl11g00403 218 Pfam PB1 domain 38 118 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00403 Eupl-Chr11 5034790 5036956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00403 22 123 MAP Kinase Kinase Kinase AT1G04700 50.980 2.54e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00403 - - nnu:104593086 211.846