Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00392 ATGGAAGCTAGTAATGGGTTCTACGCAGTCGAGGAGTTCCGTTTGGATACCAAGTGGCTAATTGATCCAAAGCATCTTTTTGTTGGACCGAGAATTGGAGAGGGAGCTCATGCCAAAGTATACGAGGGAAAATATAGAAATCAGAATGTTGCAATTAAAATTGTTCATAGAGGAGACACTCCAGAGGAGATCGCCAAGAGAGAAGCAAGGTTTGCAAGAGAGGTAGCGATGTTATCAAGAGTACAACACAAAAACTTAGTAAAGTTCATTGGGGCTTGTAAGGAGCCTGTCATGGTGGTAGTAACTGAGCTTTTATTGGGTGGTACGTTGCGGAAATACTTGCTGAACTTGCGGCCAAGGTGCTTGGAAATGCGTGTAGCAGTTGGTTTCGCACTCGACATTGCTCGGGCAATGGAGTGTTTGCATTCACATGGAATCATCCACCGTGATCTGAAGCCTGAAAATTTGATCTTGACTGCAGACCACAAAACTGTGAAACTTGTTGACTTTGGTTTAGCAAGAGAAGAGTCCTTAACAGAGATGATGACTGCTGAAACAGGGACGTATCGTTGGATGGCTCCAGAGTTGTACAGCACAGTCACTTTGAGGCATGGGGAGAAGAAGCATTACAACCACAAGGTGGATGCCTACAGCTTTGTGATCGTGTTGTGGGAACTCTTACACAACCGGTTGCCTTTCGAAGGCATGTCAAACCTACAAGCAGCCTATGCAGCCGCTTTTAAAAATACGAGGCCCAGCGCGGAAGACATCCCTGAGGATTTGGCTTTAATTCTAACTTCATGTTGGAAGGAGGACCCAAATGCCCGACCCAACTTCAGTCAAATAGTGCAGATGCTCCTACATTATCTGTCTACACTTACACCACCAGAACCCATGATTCCATCTCGCGTATTTTCTTCCGAGAATGCGGTCTTGCCGCCAGAGTCTCCAGGTACAAGCTCTTTGATGGCCATACGTGATGACTCAGGGGAAACCCAGAAGGCAAAGATGGAAAAGTCAAGGGGATTCTTCTTCTGCTTCAACCAGTGCTACTGA 1056 0.4612 MEASNGFYAVEEFRLDTKWLIDPKHLFVGPRIGEGAHAKVYEGKYRNQNVAIKIVHRGDTPEEIAKREARFAREVAMLSRVQHKNLVKFIGACKEPVMVVVTELLLGGTLRKYLLNLRPRCLEMRVAVGFALDIARAMECLHSHGIIHRDLKPENLILTADHKTVKLVDFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRHGEKKHYNHKVDAYSFVIVLWELLHNRLPFEGMSNLQAAYAAAFKNTRPSAEDIPEDLALILTSCWKEDPNARPNFSQIVQMLLHYLSTLTPPEPMIPSRVFSSENAVLPPESPGTSSLMAIRDDSGETQKAKMEKSRGFFFCFNQCY* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00392 351 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
Eupl11g00392 351 Gene3D Transferase(Phosphotransferase) domain 1 107 298 - -
Eupl11g00392 351 ProSiteProfiles Protein kinase domain profile. 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00392 351 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
Eupl11g00392 351 SUPERFAMILY Protein kinase-like (PK-like) 17 314 IPR011009 -
Eupl11g00392 351 FunFam Kinase suppressor of Ras 1 15 105 - -
Eupl11g00392 351 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 21 287 - -
Eupl11g00392 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Eupl11g00392 351 CDD STKc_MAP3K-like 32 286 - -
Eupl11g00392 351 Pfam Protein tyrosine and serine/threonine kinase 30 286 IPR001245 GO:0004672|GO:0006468
Eupl11g00392 351 SMART serkin_6 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00392 Eupl-Chr11 4926001 4933373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00392 13 351 MAP Kinase Kinase Kinase AT5G50180 81.176 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Eupl11g00392 PK_Tyr_Ser-Thr 1.6e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00392 - - mof:131145562 643.269