Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00383 ATGGCGAAATCCCTATCTCTAAATCACATTTCTCTGCTACTGTTGCGTCCCAAAACCATGGCGTCCTCAAGAACACTATCTGGTTTTATTTCTTCTAGGCTCAGTTTTCTGAAGAATAGCTTCTCAATCTCCTCTTCATGTTCCTTTTCCACTACTTCCACTCGCTACCCACTCCAATACGATCTCGTCCTTTTTCGCCCTCCTCGCTCTCCGCGCCTCCCTTTGCAGCGCCGGAGACCCGTTCTACCCGACAGAGCGAAACCCGATGACTCCCATGAACCCAATTCCGAATTGGGTTTGGATGGTTGGGTCGATCAAAAGCTGTCGGAGAGGGAGACAAACCCAACAAGTCGGGATGGTAATTTGGAGGAGATGGATAAATCCAAGAGGAAGTACTACAGGAAGCGGAGGAAGAGGATGTACGGGTCGGACTCCGACGATGACCGACCCCACGAAGACAAGTACGTGGAATTGAAGCCGGAGGTGGTCGATTTTCCAAGGCTGCACAAAAGAGAAGAGGAGTTGTATTTTTATGACGCGTTCGCGTTTCCATGGGAGAAGGAGAAGCACTATCGAATGGTGTATCAGCTGGAGAAGAAGTATTTCCCTGATCAGTGTCTTGATAAGGCGTTTGTGGAGCCTGGGGAATCAAAACCAAAGGGGAAGAACAAGTCGGGTAAGACTGGAGAGAAGAAAGATAAGGTTTTTGATGAAGCAGATGATAAGGGATTGATGTTCTTTGAGGAGGGAAAGGGGGAGAAGGATAAAAGACATATGGCTTCAGCTAAGGATGAGAATAAGGATATTTCCGAGAAGAAGGTTGAGGAGTTCTTCAAGTGTTTGAAGAAAGTACCCAACAAGGCTGCTGAAGTTGCTTCTGGGGAGCCTTATATGGTGACTAGGAATACTGAGCTTCCTCCAAGATGGGACGGCCCGCATGGGACAGTGGTCCTGGTGAACAAACCGAAAGGATGGACTTCATTTACTGTTTGTGGAAAGCTGCGCCGGCTGGTCAAAGTGCAAAAGGTTGGGCATGCTGGTACTCTTGATCCAATGGCAACTGGTTTATTGATTGTGTGTGTCGGTAAAGCTACCAAGGTGGTGGATAGTTTTCAAGGTATGATGAAGGGTTATAGTGGAGTTTTTCGGTTAGGGGAGGCTACTTCAACTTGGGATGCTGATTCACCGGTCATTCAGCGTGAGCCATGGGAACACATCAAAGATGAGGACATTAAAAAGATTGCTGCATCTTTTTGTGGGGAGATATGGCAAGTTCCTCCAATGTTTTCTGCAATCAAAGTGGGGGGTGAAAAAATGTATGAGAAAGCGAGGAGAGGAGAAACTGTCGAGCTTTCACCAAGAAGGATTTCAATTTTTCAGTTTGATATTGAACGCAGTTTAAATGACAGACAAAGTTTGATATTCCGGGTTACCTGCTCAAAAGGGACATATATTCGATCCCTTTGTGCAGATTTCGGGAAGGCTCTTGGCAGTTGTGCTCATTTAACTGCCCTACGAAGAGATTCAATTGGACAATATTCAGCAGATGATGCCTGGGATTTCCAAGAACTGGAAGAAGCAATCACCAAAGGTTACTTCTAA 1602 0.4619 MAKSLSLNHISLLLLRPKTMASSRTLSGFISSRLSFLKNSFSISSSCSFSTTSTRYPLQYDLVLFRPPRSPRLPLQRRRPVLPDRAKPDDSHEPNSELGLDGWVDQKLSERETNPTSRDGNLEEMDKSKRKYYRKRRKRMYGSDSDDDRPHEDKYVELKPEVVDFPRLHKREEELYFYDAFAFPWEKEKHYRMVYQLEKKYFPDQCLDKAFVEPGESKPKGKNKSGKTGEKKDKVFDEADDKGLMFFEEGKGEKDKRHMASAKDENKDISEKKVEEFFKCLKKVPNKAAEVASGEPYMVTRNTELPPRWDGPHGTVVLVNKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLIVCVGKATKVVDSFQGMMKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIKKIAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGETVELSPRRISIFQFDIERSLNDRQSLIFRVTCSKGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSADDAWDFQELEEAITKGYF* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00383 533 Gene3D Pseudouridine synthase 311 532 - -
Eupl11g00383 533 Pfam tRNA pseudouridylate synthase B C-terminal domain 486 529 IPR032819 -
Eupl11g00383 533 NCBIfam tRNA pseudouridine(55) synthase TruB 315 524 IPR014780 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Eupl11g00383 533 SUPERFAMILY Pseudouridine synthase 315 527 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Eupl11g00383 533 Hamap tRNA pseudouridine synthase B [truB]. 313 533 IPR014780 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Eupl11g00383 533 MobiDBLite consensus disorder prediction 78 96 - -
Eupl11g00383 533 MobiDBLite consensus disorder prediction 69 153 - -
Eupl11g00383 533 FunFam tRNA pseudouridine synthase B 310 532 - -
Eupl11g00383 533 MobiDBLite consensus disorder prediction 139 153 - -
Eupl11g00383 533 PANTHER TRNA-PSEUDOURIDINE SYNTHASE 200 531 IPR014780 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Eupl11g00383 533 MobiDBLite consensus disorder prediction 104 130 - -
Eupl11g00383 533 MobiDBLite consensus disorder prediction 212 234 - -
Eupl11g00383 533 Pfam TruB family pseudouridylate synthase (N terminal domain) 335 485 IPR002501 GO:0006396
Eupl11g00383 533 CDD PseudoU_synth_EcTruB 316 527 IPR014780 GO:0001522|GO:0003723|GO:0009451|GO:0009982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00383 316 507 NAC Transcription Factor Family AT3G57150 33.846 4.40e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00383 K03177 - ming:122077147 818.535