Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00378 ATGCCGAGCATTTCAACAGCCACAGACGAGAACAACAAGCCATTACACAATAAGTTTGTTGCTCAGTTTCGTCACCCGAAAAACAACGATTTAACGGTTTTAACAGATATCATGAACAGCACCGAACCTTCTAATGCTTCTTCTTCTACTACATTTACTTCTTCAATTACTACTTCGTGCGTTTCTTTGAAGAGAAAACGACCCCCCATGATTCAGATACCTCCCGTCTTACAGGAAATTCAAAAGGATAAGATTGGATACAGAGATAAGATGGTAGAAAAAGATGCGGTCGGACTTGATGGCAACGGAGTTGGGGTTTTCTCTATCAAAGGGAAGAAAAAGGTCATGGAAGATACCCACAAGATCATATCGGTTTTAAATGGGGATTCTAAGAAGGGTTTTTTCGGGGTTTATGATGGGCATGGAGGTCGAAAAGCAGCAGAGTTTGTTGCAGATAATTTGCACAGGAATATACTGGGTATGCTGGAGAAATGTCAAGGGGATATGGGGAAGGAGGAAGCAATAAAAGCCGGATATTTGAAAACAGATCAGGAGTTCTTGAAGCAGGGGTTAAGCAGTGGCACTTGTTGTGTCACTTGCCTGATTGAAGAGAAAGACATTGTCGTATCGAACTTGGGAGATTGCAGGGCAGTTCTCTGTAGAGGTGGTGTTGCCAAAGCCCTTACAAAAGATCACAGAGCCGAACAGGAGGACGAGCGAAACAGAATAGAAAAGAAGGGAGGATATGTGGAGATTCACCGAGGAGCTTGGAGGGTTCATGGGATACTCTCTGTTTCTAGAAGCATCGGAGATGCTCATCTGAAGGATTGGGTGCTGGCTGAGCCCGATACAAAGATCCTGAATTTGACCCCAGACATGGAATTTCTTGTCTTAGCCTCAGATGGACTGTGGGAAAAGGTGGGCAATCAGGAAGCTGTTGATATAGTGATGCGCATATGTTTGGCTGGAAGCAAACTGGGATCCACATATGATCTTTGGAAAGAAGATGAAGATGACTTTGGTTGTGAAAACACGAGTCCTCCATCAAAGGTGCGAAGAATTTCGTTGCTTAAACAACAGAAAATGAGGATTCAGTCTCCAAGTCAAGAGAGCAGCGGCTATAAGAAGAAACCAACTTCCGGTGGGCTCATGGCTGCTTGTAAGGAGCTCGTGAACCTTGCTGCGACTAGGGGCAGTTTGGATGACATAACTGTAATGATCATCGACCTAAAGCACTTCCGATGCAAATGCTGA 1254 0.4434 MPSISTATDENNKPLHNKFVAQFRHPKNNDLTVLTDIMNSTEPSNASSSTTFTSSITTSCVSLKRKRPPMIQIPPVLQEIQKDKIGYRDKMVEKDAVGLDGNGVGVFSIKGKKKVMEDTHKIISVLNGDSKKGFFGVYDGHGGRKAAEFVADNLHRNILGMLEKCQGDMGKEEAIKAGYLKTDQEFLKQGLSSGTCCVTCLIEEKDIVVSNLGDCRAVLCRGGVAKALTKDHRAEQEDERNRIEKKGGYVEIHRGAWRVHGILSVSRSIGDAHLKDWVLAEPDTKILNLTPDMEFLVLASDGLWEKVGNQEAVDIVMRICLAGSKLGSTYDLWKEDEDDFGCENTSPPSKVRRISLLKQQKMRIQSPSQESSGYKKKPTSGGLMAACKELVNLAATRGSLDDITVMIIDLKHFRCKC* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00378 417 CDD PP2Cc 102 410 IPR001932 -
Eupl11g00378 417 SMART PP2C_4 91 408 IPR001932 -
Eupl11g00378 417 MobiDBLite consensus disorder prediction 361 380 - -
Eupl11g00378 417 MobiDBLite consensus disorder prediction 361 376 - -
Eupl11g00378 417 Gene3D - 100 416 IPR036457 -
Eupl11g00378 417 PANTHER PROTEIN PHOSPHATASE 2C 57 409 IPR015655 GO:0004722|GO:0006470
Eupl11g00378 417 SUPERFAMILY PP2C-like 103 411 IPR036457 -
Eupl11g00378 417 ProSitePatterns PPM-type phosphatase domain signature. 134 142 IPR000222 GO:0043169
Eupl11g00378 417 ProSiteProfiles PPM-type phosphatase domain profile. 103 410 IPR001932 -
Eupl11g00378 417 Pfam Protein phosphatase 2C 104 318 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00378 Eupl-Chr11 4779247 4785173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00378 31 414 PP2C-type Phosphatase Gene Family AT1G67820 51.478 3.43e-131 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00378 - K17506 tss:122654041 577.4