Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00374 ATGTCGAAAGACTCAAAACCCTGGGGAGGTAAAATCGGTGCTTGGGCCGCCGATTCCGAGCGCGCCGAAGACGAAGAACGAGAGCGCCAGGCTTCCGCATCTGCAAGTTCTCAAATTCCCGGAGCCGGTGAGTCTCAGAGCTTTCCGAGCCTCAAAGAAGCCACTGCGGCCAAACCCAAGAAGAAGAAAGTGATGACGCTGTCAGAGTTCACGACCGGAGCTTACGTAGGTCCCGGTGGAGCGAGGCGCGATTCCTCTATGGAGTCTAAGGGATTAACCACAGAGGAGATGCTTCGGTTACCGACTGGGCCAAAGGAGAGGTCGCCCGAGGAAATGGAGCAGGGTCGCCTTGGCGGAGGTTTCCGATCTTACGGCCGTACTGGGGGCCCTCCCGGCCGCATGAGGGAGAGAGGTGACGACAGTGATGGATCTTGGGGTGGTCGGAAGTCTTACGGGGGTTTCGATGACGAACGGAGGGCTCCCCCTCCTAGGGGTTCTGATTTCGATGAACCTTCTAGGGCTGATGAGGTAGATAATTGGGCAATGGGGAAAAAGACTCTTCCTTCAATGGATTCTGGACGCAATGATCGGTATAGTTCGCTTGGCAGTGGTAGTGGTAGTGGAAGTGGGTCTAGGGCTGATGAGGTTGATAATTGGGCAACTGGAAAGAAATCACTTCCTGCTAGATCTACAGGCTTCGGTTCGGGCTTCAGGGATTCAGCTCCGGATTCAGATCGATGGAGCAGAGGAGGGATGCGCGATGGGGATCGTGAGAGGCCGCGGATTGTTTTGGATCCACCGCGTGGAGATGGAGCTCTGAATGATCCTTCGAAAACGACTAGGCCTAGTCCGTTTGGTTCAGCACGCCCGAGGGAGGAGGTTTTGACTGAAAAAGGGATGGATTGGAGGAAGATGGACTCTGAGATTGATACCCGGAAGACGAGTCGGCCAACAAGTTCTCATTCTAGCAGGCCTTCAAGTGCACATTCAAGCCAGCCTGAGAGCCCGGCCCCACAAGTGCTAGAAGGTGTGCCAAAGGCTCGACCAAAGGTGAACCCTTTTGGGGATGCGAAGCCTCGAGAAATCTTGCTGCAGGAGCAGGGGAAAGATTGGCGGAAGATTGATTTGGAGTTGGAGCGTCGCCGTCGTGTTGATAGGCCTGAGACAGAGGAAGAAAAGATGATGAAAGAAGAGATAGATCATCTAAAGAACCAACTGGAGAAAGAAGCTTCTGTAAATGCAAATGGGGAGTCTCTGCAAGGGTCTGGTGAAGAGGAAATAAATCCACAAGATCTGATACTTCAAAAAGAGAGGGACCTGGAACTTCTGAGCCGTGGGTTGGACGACAAAGTACGCTTCGGCCAGAGAGCCACTGACAGGCCTGGTTCTGGAGCAGGCAGGGTTGTTGGCTTTCCTGAGAGATCACATTCTCAGTTTGGTGTGCCAGAGGAGTCAAGAAATATTGAGTTCATGGACAGGCCTCGGTCCCGTGGAACTGGAGATGTGTGGAGCAGACCTGGAGAAGACAGAAGAGCTTTCCAGGGTGGTAGGGAACGAGGATTTCTTGGCAACAGAGACGTAGACAGGTCCAAGTCTAGTGATAGATGGTGA 1611 0.5332 MSKDSKPWGGKIGAWAADSERAEDEERERQASASASSQIPGAGESQSFPSLKEATAAKPKKKKVMTLSEFTTGAYVGPGGARRDSSMESKGLTTEEMLRLPTGPKERSPEEMEQGRLGGGFRSYGRTGGPPGRMRERGDDSDGSWGGRKSYGGFDDERRAPPPRGSDFDEPSRADEVDNWAMGKKTLPSMDSGRNDRYSSLGSGSGSGSGSRADEVDNWATGKKSLPARSTGFGSGFRDSAPDSDRWSRGGMRDGDRERPRIVLDPPRGDGALNDPSKTTRPSPFGSARPREEVLTEKGMDWRKMDSEIDTRKTSRPTSSHSSRPSSAHSSQPESPAPQVLEGVPKARPKVNPFGDAKPREILLQEQGKDWRKIDLELERRRRVDRPETEEEKMMKEEIDHLKNQLEKEASVNANGESLQGSGEEEINPQDLILQKERDLELLSRGLDDKVRFGQRATDRPGSGAGRVVGFPERSHSQFGVPEESRNIEFMDRPRSRGTGDVWSRPGEDRRAFQGGRERGFLGNRDVDRSKSSDRW* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00374 536 Pfam Plant specific eukaryotic initiation factor 4B 5 520 IPR010433 GO:0003743
Eupl11g00374 536 MobiDBLite consensus disorder prediction 17 31 - -
Eupl11g00374 536 MobiDBLite consensus disorder prediction 1 363 - -
Eupl11g00374 536 MobiDBLite consensus disorder prediction 453 536 - -
Eupl11g00374 536 MobiDBLite consensus disorder prediction 151 180 - -
Eupl11g00374 536 MobiDBLite consensus disorder prediction 318 337 - -
Eupl11g00374 536 MobiDBLite consensus disorder prediction 242 265 - -
Eupl11g00374 536 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 532 IPR010433 GO:0003743
Eupl11g00374 536 MobiDBLite consensus disorder prediction 192 214 - -
Eupl11g00374 536 MobiDBLite consensus disorder prediction 291 317 - -
Eupl11g00374 536 MobiDBLite consensus disorder prediction 486 536 - -
Eupl11g00374 536 MobiDBLite consensus disorder prediction 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00374 Eupl-Chr11 4748549 4755906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00374 5 529 Eukaryotic Initiation Factors Gene Family AT3G26400 51.250 1.21e-144 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00374 - - nnu:104593062 713.761