Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00371 ATGGTTTCTCTCCCTCATTTCATCTGTGTTTATAGTCTAATCTTTCTCACAGAACCCATTTTTCCTGAGCAAATCTACGACAAAACCGATTGCACATCCGAATTCCAAGTCCCCGGTTCCAACTACCTCTGCAACTCTACCAGATATCCATGCCAGACCTTCATCGTCTACAGAGCCCAACACAATTTTCAGTCACTCTCTTCCATATCCTCTCTCTTCAATTCAAACATAACCCAACTCCTCACACTCAACAATCTCACCAAATCCAACTCTCTTGACCTCCTCCGTCTCGGTCGAGAAATCATCATACCCATAAACTGTTCTTGCTCTGGACGGTTCTCGCAAGCCGTCTTCACCTACAATTCTACTGGCTCTTACACATCCCCCACCATTGCCTGTGAATTTTTTGAAGGATTGCTGAAGGCGCAAACTCTTGTAGAGCAGAACCCAAGATCTGGAGGTGAGATTTCTGATGGGGTTCAAGTCACTGTACCTGTTCGATGCGCGTGTCCCGACAGATTTGATATAGGAAATGGTGTGAAGTACCTTGTGACATACCCAATTGTAGAATCAGATAATACTAGCTTGATTGGTTTTAAATTTGGAGTCCCTGAAGAGATGATCTTGGCTGCTAATAGCTTAGAACCATTTCCTACCATCTTCCCTCAAACCACACTTCTCATTCCTACCGAGGAAATCCCAGTTTTGAATTTGGAAATTGCCTCCAATTTAAATCCAGCTCCCAGTCCAAGATCTGTGATTCCTTTGGAGAAAATATTTCCAAGTACAGGCTCAAACCAGAGGAACTCGTATATAGTGCTCGGAGTCGGTGTGTCAATTGGAATACTTCTCCTGGTTGTAGCTCTTGGGTTGTTTATAGGCATTCGAAGGCAGTGGAATCCGCGGAGTTTTCAGCCATTGTCTGCTAGAAGCTCACAATTGTCAAGTTTCACGCCTGATTTCCTTGATGGAATGTCCAAGTTAAAGCATTCCTTGCTCAATTTCAGCTTGGAGGAGCTGCGAATTGCAACTGGAGATTTCTGCGAGGCTTCGGTGATTGGTAGTTCTGTGTACCGGGGAAGGATTGGAGGTTCTCATTTGGCAATTGAACGGATGGGTTCAGAGGAGTCAGCACACCATGTCATTGACATACTGACTAAGATCAATCATCTAAATATTGTGAGACTGGAGGGTTGCTACTTCGGGACTAAGCCTTATCTTGTGTTCGAGTTTGCAGCCAACGGTTGCTTAAGGGGCTGCCTTTCAAATGAGAAGGTAGCTAGGGAGCTCACATGGACAAAAAGGATGCAAATCGCCTTTGATGTTGCAGTAGGCCTACATTACATACACTACTGCACGAGGCCGTCCTACCTCCATAGAAACGTCAACAGTAGAAATGTATTGATAACCATGGACTGGAGAGCCAAGATTTCAGGATTCAAATTGGCTAAACCTCTTACTTGCAGTGAAGACGAGATGGAGATCAAGAACTGGAATGAATCTGTGATAGTAGGTAGAACTGGTTATTTGGCACCTGAGTACCTCTGCTATGGGTTGGCTTCGCCCAAGGTGGATATATTTGCATTTGGGGTAGTTTTGCTTGAGCTAATGTCAGCTAAAGATGCAGTTATGGATGTTGGTATGTTGAAGGATTCTGTTGCATTTTTGGCGGATGGAGGGATTGAAGGTTCTTCTGGGTGTTTAGAGAAGCTGAAGGGATTCATGGATCCTGCTTTGGAGGGGGATTACCCATTGGGTGATGCTCTGTGTTTGGCACTCTTGGCCAAGGCTTGTGTGGAAGAGGACCCTCACCATAGACCGAACATGAATGATGTCTTGAAGGCTCTTTCCAGAACTGTATGA 1863 0.4487 MVSLPHFICVYSLIFLTEPIFPEQIYDKTDCTSEFQVPGSNYLCNSTRYPCQTFIVYRAQHNFQSLSSISSLFNSNITQLLTLNNLTKSNSLDLLRLGREIIIPINCSCSGRFSQAVFTYNSTGSYTSPTIACEFFEGLLKAQTLVEQNPRSGGEISDGVQVTVPVRCACPDRFDIGNGVKYLVTYPIVESDNTSLIGFKFGVPEEMILAANSLEPFPTIFPQTTLLIPTEEIPVLNLEIASNLNPAPSPRSVIPLEKIFPSTGSNQRNSYIVLGVGVSIGILLLVVALGLFIGIRRQWNPRSFQPLSARSSQLSSFTPDFLDGMSKLKHSLLNFSLEELRIATGDFCEASVIGSSVYRGRIGGSHLAIERMGSEESAHHVIDILTKINHLNIVRLEGCYFGTKPYLVFEFAANGCLRGCLSNEKVARELTWTKRMQIAFDVAVGLHYIHYCTRPSYLHRNVNSRNVLITMDWRAKISGFKLAKPLTCSEDEMEIKNWNESVIVGRTGYLAPEYLCYGLASPKVDIFAFGVVLLELMSAKDAVMDVGMLKDSVAFLADGGIEGSSGCLEKLKGFMDPALEGDYPLGDALCLALLAKACVEEDPHHRPNMNDVLKALSRTV* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00371 620 Pfam LysM domain 65 104 IPR018392 -
Eupl11g00371 620 ProSiteProfiles Protein kinase domain profile. 336 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00371 620 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 19 619 - -
Eupl11g00371 620 SUPERFAMILY Protein kinase-like (PK-like) 329 616 IPR011009 -
Eupl11g00371 620 Gene3D Transferase(Phosphotransferase) domain 1 413 620 - -
Eupl11g00371 620 CDD LysM 65 103 IPR018392 -
Eupl11g00371 620 Gene3D Phosphorylase Kinase; domain 1 323 411 - -
Eupl11g00371 620 FunFam PTI1-like tyrosine-protein kinase 3 412 620 - -
Eupl11g00371 620 Pfam Protein tyrosine and serine/threonine kinase 376 559 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00371 Eupl-Chr11 4719240 4721102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00371 1 618 Receptor kinase-like Gene Family AT2G23770 31.587 1.22e-81 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Eupl11g00371 PK_Tyr_Ser-Thr 7.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00371 - - vvi:100248488 731.095