Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00365 ATGGAGTGTTTGATGGAGTTTCCTCACACTCACATGGATCGACGTCCCCTAAAGAGGCCAAGATTAGCTTGGGATGTTCCTCAGACCCCAAAGGCTCAGCCAGGAATGTATTGTGGACAAGAGGTTGGAAATATGACAAGCTTTGCACCCTCGAGGGCACCCTCAGACCATACTAGTTCCTCTCTATTTGTAAAGGGAGTGGCTCGAAATGGTTCTCCCCCATGGCGAGATGATGACAAAGATGGACATTACATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAGGATCCACAGCAAAATGGGTGAAGGGACCTTTGGCCAGGTTTTGGAATGCTGGGACAGGGAAAGGAATGAAATGGTTGCCATTAAAATTGTCCGTGGTATTAAGAAGTATCGTGAAGCAGCAATGATAGAAATTGATGTGCTCCAACAGCTTGCAAAGCATGACAAAAGTAGCAGTCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTATTTGAGAAGCTTGGACCAAGCTTATACGATTTTCTACGGAAAAACAATTATCGCTCATTTCCAATTGATCTAGTCCGCGAGCTTGGCAGACAACTGTTGGAATGTGTAGCATTTATGCATGATTTGCGCCTCATCCATACTGATTTGAAGCCCGAGAACATACTTCTTGTTTCTCCAGAGTATGTAAAAGTACCAGACTACAAGGTTTCATCTCGATTGCCCAATCATTGGGCCTACATCAAGAAGCTGCCAAAGTCAAGTGCCATCAAGGTAATTGATTTTGGTAGCACAACTTATGAGCATCAAGATCATAGCTACATTGTATCAACACGGCACTATCGTGCCCCCGAGGTTATTCTTGGACTTGGATGGAGATTCCCTTGTGATATATGGAGTGTCGGTTGTATCTTGGTGGAGCTTTGCTCGGGAGAAGCATTATTTCAGACGCACGAGAACTTGGAGCATCTGGCCATGATGGAGAGGGTGTTGGGCCCTCTACCTCAGCATATGTTGAAGAGAGTAAACCGGCATGCTGAGAAGTATGTCAGAAGGGGCAGATTGGACTGGCCAGAGGGTGCGACCTCAAGGGAGAGCATTAAAGCAGTTTTGAAGCTGCCTCGTCTTCAGAACCTAGTGATGCAACATGTTGACCACTCAGGAGGGGATCTCATAGACCTCTTGCAAAGACTACTCAGGTATGATCCTTCGGACCGGCTGACAGCTCGAGAAGCTCTCAGACACCCCTTCTTTACAAGGGACCTTCACAGGAGATCTTAA 1296 0.4583 MECLMEFPHTHMDRRPLKRPRLAWDVPQTPKAQPGMYCGQEVGNMTSFAPSRAPSDHTSSSLFVKGVARNGSPPWRDDDKDGHYMFALGENLTSRYRIHSKMGEGTFGQVLECWDRERNEMVAIKIVRGIKKYREAAMIEIDVLQQLAKHDKSSSRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVRELGRQLLECVAFMHDLRLIHTDLKPENILLVSPEYVKVPDYKVSSRLPNHWAYIKKLPKSSAIKVIDFGSTTYEHQDHSYIVSTRHYRAPEVILGLGWRFPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPQHMLKRVNRHAEKYVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSGGDLIDLLQRLLRYDPSDRLTAREALRHPFFTRDLHRRS* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00365 431 ProSiteProfiles Protein kinase domain profile. 96 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00365 431 CDD PKc_CLK 83 423 - -
Eupl11g00365 431 Coils Coil 428 431 - -
Eupl11g00365 431 SMART serkin_6 96 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00365 431 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 5 426 - -
Eupl11g00365 431 FunFam Serine/threonine-protein kinase AFC2 172 423 - -
Eupl11g00365 431 SUPERFAMILY Protein kinase-like (PK-like) 83 426 IPR011009 -
Eupl11g00365 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Eupl11g00365 431 FunFam Serine/threonine-protein kinase AFC2 83 176 - -
Eupl11g00365 431 Gene3D Phosphorylase Kinase; domain 1 83 176 - -
Eupl11g00365 431 Gene3D Transferase(Phosphotransferase) domain 1 150 423 - -
Eupl11g00365 431 Pfam Protein kinase domain 96 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00365 Eupl-Chr11 4627064 4633522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00365 101 431 Core Cell Cycle Gene Families AT1G76540 26.023 3.56e-30 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Eupl11g00365 Pkinase 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00365 K08287 - nnu:104591529 819.69