Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00349 ATGGATTCCCTTCCCCCGAAATTCTATCTCCCTCTCTTCTGTTTCCTCTCTCTCGCCCTTCTAATCCAAGGAAGATTAAATCTCGACCGTTTGGATTCCGATGCTCTCTTGCTTTTCAAGAAAGACTTGGGTTTCAAGAGTCAACGCCACCTGCCGCGTAACCACTGCAACTTCACCGGGATCTTCTGCGAGAGTAGAATCTCCGGCAACTCGGTGGTACTTCGAGTAACTCGAATCGTCCTGGATTCACAACGGCTCGACGGATTCTTATCTCCGGCAATTGGACGGTTCTCGGAGCTGAAAGAGCTCTCTCTCCCTAACAACCACCTCGTCGACAGAATTCCTCCCGAAATCGTTGACTGCCGAAAGTTGGAGGTTCTAAACCTTCGAAATAACCGTCTTTCCGGCAAAATTCCGTCGGAATTCTCGTCGTTTGTAAGTCTCCGAGTCCTCGATCTCTCAACAAATAGATTTTCTGGTGATTTGAGCTTCTTGAAATATTTTCCCAACCTCGAAAACCTCTCTCTTTCGGATAATTTGTTTACTGGAAAAATCCCAACTTCGTTGCGTTCTTTCCGTAATCTCCGATTTCTCAATCTTTCCGGCAATAATTATCTCCAAGGTCCGATACCGGTGTCGTTGAACCAGCTAGAGTATTCCCTTCCTGAGTTAAAGACAAAGATCGTACTACCGAAACGTTACATATTTGCCGAGAATTCGGCAAGAAATGGCTCTGCCATGGCACCATCTCCAAGTAGAACCCCCAGTGCAGACCCTTCTGTGGCTCCTGCTCCCTTGAAACATCATCCCTCGAAACATCACAATAACAAAAGAAAGCTAAGGGATTATATTCTTGGATTCCTCGCCGGTATAATTGCCGGAATGATTTCAGGATTGATCTTCTCTGTGATATTCAAGATTCTCTTGAGTTGCATCAGAGGGAGAGGGAAGGACTCAGGTCCGGCGATCTTCAGTCCGATGATCAAGAAGGCTGAGGACCTTGCCTTCTTAGAGAAAGAAGATGGACTTGCGTCTATGGAAATCATCGGTCGAGGTGGGTGTGGAGAAGTTTACAAAGCTGAATTGCCTGGAAGCAATGGAAAAATGATTGCAATCAAGAAGATAATTCAACATCCTATCGATGCAGCTGAGCTTGCTGATGAAGATAGCAAGCTTCTAAGCAAGAAGATGCGACAAGTTCGATCTGAAATTAATACTGTCGGTCAGATTCGACATCGAAACCTCCTCCCTTTGTTGGCTCATGTGTGCCGACCTGACTGCCATTACCTTGTCTACGAGTTCATGAAGAATGGGAGCTTACAGGATTTGTTGAAACAGGTTTCAGAAGGAACCAGAGAATTGGATTGGCCGATTAGGCATCGGATTGCCATGGGGGTCGCTGCAGGCCTAGAGTATCTCCATATGCACCACAGCCCCAAAATAATTCACAGGGATCTCAAGCCCGGAAACATCCTCCTCGACGATGACATGGAGGCCCGAATTGCAGACTTTGGGCTCGCCAAGGCAGTCCCGGAATACCACACCCATGTAACGACTAGCAACGTGGCAGGGACAGTGGGTTACATTGCACCAGAGTATCATCAAACACTCAAGTTCACAGACAAGTGCGACGTGTATAGCTTTGGGGTGCTACTGGCAGTGTTAGTGATGGGCAAGTTGCCATCCGATGACTTCTTCCAACACACTGACGAGATGAGCCAAGTGAAGTGGCTGAGGAATGTCATGACCTCAGAGAACCCCAACAGAGCAATCGATCCTAAACTCATGAAAAATGAGTTCGAGAACCAGATGCTCCTGGTTCTCAAGATTGCTTGCTTCTGCACTCTGGATGATCCAAAGCAGAGGCCCAACAGTAAAGATGTTCGGTGCATGTTGTCTCAGGTGGATCGCTAA 1914 0.4718 MDSLPPKFYLPLFCFLSLALLIQGRLNLDRLDSDALLLFKKDLGFKSQRHLPRNHCNFTGIFCESRISGNSVVLRVTRIVLDSQRLDGFLSPAIGRFSELKELSLPNNHLVDRIPPEIVDCRKLEVLNLRNNRLSGKIPSEFSSFVSLRVLDLSTNRFSGDLSFLKYFPNLENLSLSDNLFTGKIPTSLRSFRNLRFLNLSGNNYLQGPIPVSLNQLEYSLPELKTKIVLPKRYIFAENSARNGSAMAPSPSRTPSADPSVAPAPLKHHPSKHHNNKRKLRDYILGFLAGIIAGMISGLIFSVIFKILLSCIRGRGKDSGPAIFSPMIKKAEDLAFLEKEDGLASMEIIGRGGCGEVYKAELPGSNGKMIAIKKIIQHPIDAAELADEDSKLLSKKMRQVRSEINTVGQIRHRNLLPLLAHVCRPDCHYLVYEFMKNGSLQDLLKQVSEGTRELDWPIRHRIAMGVAAGLEYLHMHHSPKIIHRDLKPGNILLDDDMEARIADFGLAKAVPEYHTHVTTSNVAGTVGYIAPEYHQTLKFTDKCDVYSFGVLLAVLVMGKLPSDDFFQHTDEMSQVKWLRNVMTSENPNRAIDPKLMKNEFENQMLLVLKIACFCTLDDPKQRPNSKDVRCMLSQVDR* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00349 637 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Eupl11g00349 637 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 68 634 - -
Eupl11g00349 637 Gene3D Phosphorylase Kinase; domain 1 331 434 - -
Eupl11g00349 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Eupl11g00349 637 ProSiteProfiles Protein kinase domain profile. 343 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00349 637 FunFam Leucine-rich repeat receptor-like protein kinase 435 637 - -
Eupl11g00349 637 Pfam Protein kinase domain 346 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00349 637 FunFam leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 330 434 - -
Eupl11g00349 637 Gene3D Ribonuclease Inhibitor 164 227 IPR032675 -
Eupl11g00349 637 Gene3D Ribonuclease Inhibitor 30 163 IPR032675 -
Eupl11g00349 637 Gene3D Transferase(Phosphotransferase) domain 1 435 636 - -
Eupl11g00349 637 SUPERFAMILY Protein kinase-like (PK-like) 336 632 IPR011009 -
Eupl11g00349 637 MobiDBLite consensus disorder prediction 243 257 - -
Eupl11g00349 637 SUPERFAMILY L domain-like 46 223 - -
Eupl11g00349 637 SMART serkin_6 343 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00349 637 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 71 162 - -
Eupl11g00349 637 MobiDBLite consensus disorder prediction 243 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00349 Eupl-Chr11 4453908 4456235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00349 10 635 Receptor kinase-like Gene Family AT2G31880 61.234 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Eupl11g00349 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00349 - - nnu:104593027 939.488