Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00344 ATGGATAGCAAAGAAAGCGTGTCGGTCTTTCAGCTTTTCCGATACGCTGATGGCGTCGACAAGTGCTTGGTGTTGTTGGGTACTCTCGGTAGCATCGGTGATGGGATGATGAACCCTCTCACCATGTTGGCTCTCAGCAGCGTGATGAACGAGTATGGATCTGCTGATCTCTCTTTCTCCAATCATGTGGTGGACAAGTTACCGAACTGTCTTGCCCACTTCTCGTCGTTTATCTTCTGCCTCGTGGTCGGTTTCTTACTGTCATGGAGGCTGGCTTTGGCTGCCTTTCCGTTCTCACTCATGTTCATTGTCCCGGGTGTTGGATTTGGTAAGCTCCTAATGGACCTGAGGAAGAAGATGAATGATGCTTATGGGGTTGCAGGCGGAATTGCAGAACAAGCAATCTCATCAATCCGAACTGTGTTTTCTTACGTGGGAGAATGTCAAACACTAGAGAGGTTCAGCCATGAGCTACGACAAAGTATGGAGTTTGGAATAAAGCAAGGATTTGCAAAAGGATTGCTGATTGGGAGCATGGGAATGATTTTCGCAGCTTGGGCTTTCCAGGCTTGGGTCGGGAGTGTTCTCATAACTGAGAGGGGGGATAAAGGTGGTCCTATCTTCATCGCCGGTGTCTGTATAATCCTTGGAGGATTGTCTATTATGAATGCACTCCCCAATATCACATTCTTCTCAGAGGCAACAGCTGCAGCTTCACGAATATTCGAGATGATTGACCAGCTTCCTGCCATAGACTCTGAAGATGAAAAAGGGAAGGTCATTGAATCAGGTAGTCATGAAGAGCTGACCCAAATGAACAATGGAGGTGGGGCCTACTCTAGAATGGTGCAGTTACAGCAAACAACAATGCAAAATGAAGCTTCAGATCCTTCTTATTTACCAACAGAAGTCATTACTATGATGACCCAGGTGAAGGAAAGTTAA 945 0.4646 MDSKESVSVFQLFRYADGVDKCLVLLGTLGSIGDGMMNPLTMLALSSVMNEYGSADLSFSNHVVDKLPNCLAHFSSFIFCLVVGFLLSWRLALAAFPFSLMFIVPGVGFGKLLMDLRKKMNDAYGVAGGIAEQAISSIRTVFSYVGECQTLERFSHELRQSMEFGIKQGFAKGLLIGSMGMIFAAWAFQAWVGSVLITERGDKGGPIFIAGVCIILGGLSIMNALPNITFFSEATAAASRIFEMIDQLPAIDSEDEKGKVIESGSHEELTQMNNGGGAYSRMVQLQQTTMQNEASDPSYLPTEVITMMTQVKES* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00344 314 Pfam ABC transporter transmembrane region 60 199 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl11g00344 314 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 58 233 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl11g00344 314 PANTHER ABC TRANSPORTER B FAMILY 4 60 IPR039421 -
Eupl11g00344 314 CDD ABC_6TM_Pgp_ABCB1_D1_like 65 241 - -
Eupl11g00344 314 Gene3D ABC transporter type 1, transmembrane domain 61 288 IPR036640 GO:0005524|GO:0016020
Eupl11g00344 314 Gene3D ABC transporter type 1, transmembrane domain 3 60 IPR036640 GO:0005524|GO:0016020
Eupl11g00344 314 SUPERFAMILY ABC transporter transmembrane region 13 252 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00344 Eupl-Chr11 4402176 4405611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00344 63 279 Calmodulin-binding Proteins AT2G36910 29.358 3.25e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00344 K05658 - fve:101309993 295.049