Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00320 ATGGTCATTAATCCGAACCGCTCAATTGTTAGACCACCAATTAAGTCAGCCATGAATATTAAAGCCACACGCTCTCCGAGAAAGAGTGAGCAAGAGAGAGAGAGAGAGAGGGAGGGAGGGAGCAAAATGTGCTCCAACAACAACAAAAACATTCGTTCTGATCACCAAAGCCGCTCCACGAGCAACAAAAACAAAAGCAAAGCCACTCTCTCCCCAAAACCACCTCGGAAAACCAGAACCAAAACTAAAAAACCCAAATTTCTCAGTCTCCGCCGAGAAATCTCGCCGGCAAGTTCACCGGATTCCGGCGAAATGACCCACAACCACCACCAGCTTAACTTATTTCCCTTACACCCAGAAAACCTTTTTGAAGAGAAAGACATACAGGACGACAACGTGACGTACTTCTTCGACGCAGACGGTGGGGCTACCTTGACCGGCCTCCTTGGGGGAGGTGGAGGTGGAGGGGATGTTGTGTCCTCTGAGGACGATTCGTTATCTCCGTCGCTAACTTACGCGTACGGAGGGCAGCAGAGTGATGAGGGGGCGAGTAATTTGGAGAGAACGGCTTTGAGGCATAAGGAGAGAGACGCTAGTGAGGAGAAGTGGGTGTTTTATCCGGCAGTGGTGGAGAAGAAGGAGGAGGAGGTGACTAGCTGCGCCTCGGACTATCTGTATCAAAATCAGACGCAAGGTCTGTCGTTGAAACTCGATTATCAGGAGATCATGAACGCTTGGTCGGATAAGGGCCCACTTTACATCGAAGGAGAGTGCCCGCAGATCGTTCCCGACGTCCTCGATGATTCCCTTGCGCAAGATAGCACCAACGTGTTAGTACCGCTATGGAGAGTCCCGGATGACAAAAGCAGTGCAATCGAGGGCGTTGATGGGGAAGGATCGAAGATGGGGCAGAGAGAAGCTAGGGTGTTAAGATACAAGGAGAAAAGGCAAAGCCGGCTCTTCTCTAAGAGGATCAGATACGAAGTTAGGAAGCTCAACGCTGAGAAGCGCCCGCGGATGAAGGTTCCTTTTTTTTACTTTGACCCTAATAGAATATGA 1059 0.5005 MVINPNRSIVRPPIKSAMNIKATRSPRKSEQEREREREGGSKMCSNNNKNIRSDHQSRSTSNKNKSKATLSPKPPRKTRTKTKKPKFLSLRREISPASSPDSGEMTHNHHQLNLFPLHPENLFEEKDIQDDNVTYFFDADGGATLTGLLGGGGGGGDVVSSEDDSLSPSLTYAYGGQQSDEGASNLERTALRHKERDASEEKWVFYPAVVEKKEEEVTSCASDYLYQNQTQGLSLKLDYQEIMNAWSDKGPLYIEGECPQIVPDVLDDSLAQDSTNVLVPLWRVPDDKSSAIEGVDGEGSKMGQREARVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKVPFFYFDPNRI* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00320 352 ProSiteProfiles CCT domain profile. 305 347 IPR010402 GO:0005515
Eupl11g00320 352 MobiDBLite consensus disorder prediction 70 86 - -
Eupl11g00320 352 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 37 344 - -
Eupl11g00320 352 MobiDBLite consensus disorder prediction 1 108 - -
Eupl11g00320 352 Pfam CCT motif 305 344 IPR010402 GO:0005515
Eupl11g00320 352 MobiDBLite consensus disorder prediction 25 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00320 Eupl-Chr11 4138592 4143281 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00320 227 344 C2C2-CO-like Transcription Factor Family AT1G73870 41.600 1.42e-18 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl11g00320 CCT 3.3e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00320 - - vvi:100254358 325.094