Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00309 ATGGCAGCAGCAGGAGCATCAGCAACAGCGGCAGCAGCTATAACAGAGTCACCTCCAGAGGTCCCTCAATGGCTTAAAACCCTACCATTAGCCCCAGAATACCACCCAACCCTTGCAGAATTCCAAGACCCCATCTCTTACATTCTCAAGATAGAGAAAGAGGCCTCCAAGTATGGAATCTGCAAGATCGTTCCTCCGCTCCCACCACCGCCTAAGAAAACAGCAATTTCCAACCTCAACCGCTCCCTTGCCGCCAGAAACCTTAACTCTAACCCTAAATCCCCACCTACATTCACCACCCGACAGCAACAGATCGGATTCTGCCCCCGGAAGTCTCGGCCCGTTCAGAAACCCGTATGGAAGAGCGGCGAAACCTATACTCTCCAGCAATTCGAAGCTAAAGCTAAGCATTTCGAGAAGACCCATTTGAAGAGAAGTGGGAAGAAGGGGTTTTCGGCGCTGGAAATCGAAACCCTTTTCTGGAAGGCCAGTGTAGATAAACCATTCTCGGTGGAGTACGCGAATGACATGCCCGGGTCTGCGTTTGTGCCCATTAATGGGAAGAAATGGAGGGAAGCAGGGGAGGCAGCGACGGTTGGGGAGACGGCGTGGAATATGAGAGGGGTTTCGAGGGCGAAAGGGTCGTTGTTGAGGTATATGAAGGAGGAAATACCTGGTGTTACTTCGCCGATGGTGTATCTGGCAATGATGTTTAGTTGGTTTGCTTGGCATGTAGAGGATCATGATTTGCATAGTTTGAACTATTTGCACATGGGGGCGGGGAAGACTTGGTATGGAGTGCCGAGGGAAGCGGCAGTTGCGTTCGAGGAGGTAGTCAGGGTGCATGGCTATGGAGAAGAGGTCAATCCACTTGTTACTTTTGCTATTCTTGGCGAGAAGACCACGGTCATGTCCCCCGAAGTACTTATTGGTGCAGGAATCCCTTGTTGCAGATTGGTGCAAAATGCTGGAGAGTTTGTTGTCACTTTCCCAAGAGCCTATCATTCAGGGTTCAGCCATGGATTTAATTGTGGAGAGGCAGCAAATATTGCTACTCCTGAATGGTTAAGAGTTGCGAAAGAAGCTGCAATTCGTAGGGCTTCAATCAACTATCCTCCGATGGTGTCTCATTTTCAGCTGCTCTATTCACTGGCACTAACATTATGTTCAAGGGTACCTATGAGCATTGGTTCCGAGCCACGTAGCTCCAGACTAAAAGATAAGAAGAGGGGTGAAGGAGAAATCATGGTCAAAGAGCTATTTGTGCAGAATGTAATACAAAATAATGGCCTACTACATGTTCTTCTTGAACAGGGATCTTCTTGTGTACTTCTTCCACAAAATTCTTCAGAAAAATCTGTATGTTCAAATTTACGTGTCGGATCCCAAATAAAGGTAAAACCCAGGTTGTCACTTGGTTTATGCAGTCCTGAGGAAGAACTGGAAACCTCAAAATTTGTACTTTCCAATGATATCATGCTAGAAAGGAACACGCGGATCAGGCATTTGAGTGGGTTCCATTCACTGAAAGGATCTAGTGCCGTATGTGAAGGAAACAGACTTCCGTCATTATCGGTGAAATATGGCCAGCATAGAAATGCTGATTTGTGCACTTCCACTTCAGAGACACGAGGCACCAACACTGAAAAAGAAAGTACCTCTCCATGTGACAGGTTGTTAGATCAGGGACTGTTTTCATGCGTCACATGTGGGATATTGAGCTTTGCATGCACAGCTGTCATTCAACCTAGAGAAGCAGCTGCCCGATACTTCATGTCTGCTGATTGCAGCTTTCTTAAAGATTGGATTGCTGGTTCTGGAGCACCTGATGACAGATATAGTGTTTATGCACGTGCTTCTGAGCTGAATTCCTGCTCAGGACGAATGGAGAAGAGTTACCAGGATGGACTCTATGATGTTCCGGTCCAGTCTGGAGATTATGAAGTCCAAGTGGCAGATCAAAGGGTTGAAGTGGTTTCAGATTCTGAAACCCAGAAAGACATTTCCTCTCTTGATCTGCTAGCTTTTGCTTATGGAAACTCATCAGAGTCTGAGGAAGAGCAGGTTGAACCTGAGAAGCCTGTGAGCGCTGATGAAGATGATATGGGAGACTGTTCACCACTATCTGATCAGAATGAGCAGTCTGGATCTGCACATGGAAATTTCTTATCTAAAAATAATTTTATATGTGATGATTCTGCATTGCATTCACTTGAGCCAGACCATCATGATGGAGCAGCTGGGAGTATTTCTCACCCTTCAAGACTAGATTGTGGAAATGAAGTTTCTGTTCAAATTTCTCGATGCCCCAGTGCTTTCTATAGGAAGCATGGATGGTCAAGTGCTACTGTCAAGGGTAGAAGTAGGAAGCATGGATGGTCAAGTGCTACTGTCAAGGGTAGAAGTCAACAGACTTTGGATTGTTCCTTCAAGAGTGACATGGAGAATCTAGAGTCCCTACATTCAAATACTTTAAAGGTTTCATATAGAGATACAGTGACCATATCTGGGAGGGTGATAACTAGATCTGCAGAAGTTCATCAGAGTGATGTGAAGCTAGAAATGGAGTGTGGTCCTGCAGATTACCATACGCTTTCCAATTCTTCACATGCCCTGTCAAATTGTTCCCCCCCAGCCATGCCCTCTGGTGAGATAACCAAGTTTGACAACGTTGACATATCAATGAAGAACACAAACATGTCAGTAAAGTCAAGATCTGATGAAGACTCCTCTATAAAGCATATATTTTGTCTCGAGCATGCTGTGGAGGTAGAAAAGCAACTTCGATCAAAAGGTGGAGTGGATATGTTGCTTCTGTGTCCTGCGGACTATCCTAAAATAGAAGCAGAAGCAAAATCATTGGCAGAAGAATTGGGAATCGATTATCTCTGGAAGGATATTTCATTCAGTGAGGCTACCGAAGAGGATCACGAGAGAATCCGATCAGCTCTGGATCAGGAGGAATCCATCCCCGGGAATGGGGACTGGGCTGTAAAGCTGGGTATGAATCTCTATTACAGTGCCAATCTCAGCCAGTCTCCTCTCTACAGTAAGCAGATGCCGTACAATTCAGTCATATACAAGGCATTTGGCCGCAGTTCTCCAGCCAATTCCCCAACAAAACCTAAGGTTTCAGGGAAGGGGCCTGGCAGGCAGAAGAAAATAATTGTTGCAGGCAAATGGTGTGGGAAGGTCTGGATGTCGAACCAGGTTCATCCTTACCTAGCTCAGAGAGATAACCAAGAAGAACCTTCCAGAAGCTTCCACCCTCGAGCAACGTCAGAACTGAAACTTGAGAGGAAACAAGACATTAGCTGCCAGGCTGAACAACCACTGGTTTCTAAAAATAGCTCCTTACTGGGTGTAACCACCACCACTTTAGCTAGACAGCCTGGACAGAAGAGGAAAAACACATTTCAGAAGGGGACAACCAAGAAACCCAAATGCTTCCAACTGGACAACCCAGTTGAAGCTGCAGAAGATTCACCAGAGAATAGTTACCCTCCACAATGTGGAAGGAGTCGTAGAAGTGCACAAACAAAACATGACACATCACTGCATCGTTGGAACGGCGCGAAGAGCATCCAACGACATGATTCAAATTTGAATGACGAGACTGAAGGTGGACCCAGCACACGCCTTAGAAAAAGGCTGTCGAAGCCCCTTAAAGAAGTTGAAGTCAAACCAGAGGGCATAAAGCAAACCAGGAAGAAGGCGGCGAAGAAGGCTTCGCCTAGTAGTAAGAACATAACAATAAAGGACGAGGATGCGGAATACCAGTGTGACATGGAAGGTTGCACAATGGGATTTAGATCGAAGCAGGAGCTGGTGTTGCACAAGCGCAACATCTGTTCAGTGAAGGGGTGTGGGAAGAAATTCTTCTCCCACAAGTATCTGGTGCAGCACAGGCGAGTCCACATGGACGATCGTCCCCTGAAGTGCCCGTGGAAGGGGTGTAAGATGACGTTCAAGTGGGCGTGGGCTCGGACCGAGCACATAAGGGTGCACACTGGTGCCCGGCCTTACGTGTGCCGTGAGCCAGGTTGTGGCCAGACGTTCAGGTTTGTGTCGGATTTCAGCCGTCACAAGCGGAAGACAGGTCATTCAGTGAAGAAGGGTAAAGGATAG 4128 0.4673 MAAAGASATAAAAITESPPEVPQWLKTLPLAPEYHPTLAEFQDPISYILKIEKEASKYGICKIVPPLPPPPKKTAISNLNRSLAARNLNSNPKSPPTFTTRQQQIGFCPRKSRPVQKPVWKSGETYTLQQFEAKAKHFEKTHLKRSGKKGFSALEIETLFWKASVDKPFSVEYANDMPGSAFVPINGKKWREAGEAATVGETAWNMRGVSRAKGSLLRYMKEEIPGVTSPMVYLAMMFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPREAAVAFEEVVRVHGYGEEVNPLVTFAILGEKTTVMSPEVLIGAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEAANIATPEWLRVAKEAAIRRASINYPPMVSHFQLLYSLALTLCSRVPMSIGSEPRSSRLKDKKRGEGEIMVKELFVQNVIQNNGLLHVLLEQGSSCVLLPQNSSEKSVCSNLRVGSQIKVKPRLSLGLCSPEEELETSKFVLSNDIMLERNTRIRHLSGFHSLKGSSAVCEGNRLPSLSVKYGQHRNADLCTSTSETRGTNTEKESTSPCDRLLDQGLFSCVTCGILSFACTAVIQPREAAARYFMSADCSFLKDWIAGSGAPDDRYSVYARASELNSCSGRMEKSYQDGLYDVPVQSGDYEVQVADQRVEVVSDSETQKDISSLDLLAFAYGNSSESEEEQVEPEKPVSADEDDMGDCSPLSDQNEQSGSAHGNFLSKNNFICDDSALHSLEPDHHDGAAGSISHPSRLDCGNEVSVQISRCPSAFYRKHGWSSATVKGRSRKHGWSSATVKGRSQQTLDCSFKSDMENLESLHSNTLKVSYRDTVTISGRVITRSAEVHQSDVKLEMECGPADYHTLSNSSHALSNCSPPAMPSGEITKFDNVDISMKNTNMSVKSRSDEDSSIKHIFCLEHAVEVEKQLRSKGGVDMLLLCPADYPKIEAEAKSLAEELGIDYLWKDISFSEATEEDHERIRSALDQEESIPGNGDWAVKLGMNLYYSANLSQSPLYSKQMPYNSVIYKAFGRSSPANSPTKPKVSGKGPGRQKKIIVAGKWCGKVWMSNQVHPYLAQRDNQEEPSRSFHPRATSELKLERKQDISCQAEQPLVSKNSSLLGVTTTTLARQPGQKRKNTFQKGTTKKPKCFQLDNPVEAAEDSPENSYPPQCGRSRRSAQTKHDTSLHRWNGAKSIQRHDSNLNDETEGGPSTRLRKRLSKPLKEVEVKPEGIKQTRKKAAKKASPSSKNITIKDEDAEYQCDMEGCTMGFRSKQELVLHKRNICSVKGCGKKFFSHKYLVQHRRVHMDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCREPGCGQTFRFVSDFSRHKRKTGHSVKKGKG* 1376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00309 1375 MobiDBLite consensus disorder prediction 1176 1237 - -
Eupl11g00309 1375 MobiDBLite consensus disorder prediction 680 718 - -
Eupl11g00309 1375 ProSiteProfiles JmjN domain profile. 31 72 IPR003349 -
Eupl11g00309 1375 FunFam Probable lysine-specific demethylase ELF6 1309 1338 - -
Eupl11g00309 1375 SUPERFAMILY Clavaminate synthase-like 213 372 - -
Eupl11g00309 1375 Pfam JmjC domain, hydroxylase 231 349 IPR003347 -
Eupl11g00309 1375 SUPERFAMILY beta-beta-alpha zinc fingers 1298 1340 IPR036236 -
Eupl11g00309 1375 ProSitePatterns Zinc finger C2H2 type domain signature. 1314 1336 IPR013087 -
Eupl11g00309 1375 MobiDBLite consensus disorder prediction 1125 1147 - -
Eupl11g00309 1375 SMART c2h2final6 1342 1368 IPR013087 -
Eupl11g00309 1375 SMART c2h2final6 1312 1336 IPR013087 -
Eupl11g00309 1375 SMART c2h2final6 1259 1281 IPR013087 -
Eupl11g00309 1375 SMART c2h2final6 1282 1306 IPR013087 -
Eupl11g00309 1375 ProSiteProfiles JmjC domain profile. 201 367 IPR003347 -
Eupl11g00309 1375 SMART cupin_9 198 367 IPR003347 -
Eupl11g00309 1375 ProSiteProfiles Zinc finger C2H2 type domain profile. 1282 1311 IPR013087 -
Eupl11g00309 1375 ProSitePatterns Zinc finger C2H2 type domain signature. 1284 1306 IPR013087 -
Eupl11g00309 1375 ProSiteProfiles Zinc finger C2H2 type domain profile. 1312 1341 IPR013087 -
Eupl11g00309 1375 Gene3D Cupin 24 371 - -
Eupl11g00309 1375 MobiDBLite consensus disorder prediction 1077 1102 - -
Eupl11g00309 1375 ProSiteProfiles Zinc finger C2H2 type domain profile. 1342 1373 IPR013087 -
Eupl11g00309 1375 SMART JmjN_1 30 71 IPR003349 -
Eupl11g00309 1375 FunFam Probable lysine-specific demethylase ELF6 24 371 - -
Eupl11g00309 1375 Gene3D Classic Zinc Finger 1279 1366 - -
Eupl11g00309 1375 MobiDBLite consensus disorder prediction 686 700 - -
Eupl11g00309 1375 MobiDBLite consensus disorder prediction 1082 1102 - -
Eupl11g00309 1375 ProSitePatterns Zinc finger C2H2 type domain signature. 1344 1368 IPR013087 -
Eupl11g00309 1375 MobiDBLite consensus disorder prediction 1125 1248 - -
Eupl11g00309 1375 PANTHER LYSINE-SPECIFIC DEMETHYLASE 23 1308 - -
Eupl11g00309 1375 Pfam jmjN domain 32 65 IPR003349 -
Eupl11g00309 1375 SUPERFAMILY beta-beta-alpha zinc fingers 1330 1364 IPR036236 -
Eupl11g00309 1375 FunFam Probable lysine-specific demethylase ELF6 1339 1368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00309 Eupl-Chr11 4035899 4046175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00309 199 444 C2H2 Transcription Factor Family AT5G04240 59.109 8.49e-95 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl11g00309 JmjC 5.5e-37 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00309 - - tss:122670835 1770.75