Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00299 ATGGGTAGTGGTAAGGTTGGAGCTTGCGAAGAGTGTACCCTCAAATGCATGTCGATTCATGACCGGAAAGACCCATTACCCGTTGTTACTTCTTTCTTCAAGATCATGATCGGCGATCGATTTTCAAGAGCTCTGTTCGTACCTCCTCAATTTGCCCAGACATTAGCATCTTCCGTTGATCAGAAAATTTACCTTGAAGATCGAAATGGACAGCGTTGGAGGGTGACGTTATCTACCCTTGATGGCTCGTTGGCTTTTCAACAAGGATGGCATGAATTTGCATTAGATCATTGTTTAGAAATTGGAGATTTTGTGGTATTTAAATATATTATTGGTTCGCACTTTGTAGTTCACATCTATGGTAAAAGTGGCTGTGAAAAGGTAAATTTCTTTGAGAAAGGGAACAACAGCAAGGGGAAAAGAACTAGACCTAAAAATTCATTGGATCATTTGCCTTCAGATGTTAGAAATTCGAAAGCCACAGAAGGCCCATGCCACACGATTGATAAGGCTTCAGTGAACGAACAAGGATCAAGCTCAACTGTTCGTTCTGATTCTGACATTGAAATAATTCAGAGCAAATGCAATGTCAAACATGTGGAGAAAGTACCCATGGACACAGATAAGACTTCCCATTGCGATAATAGCAATACAAAATCCCAACCTGTGTCACCAGTAGACTACACTGAAGTACCATTCTACATGATTGATAGAGACCCGGTGGACAGACAAGTAGCACATGGAACCTCTCATTTCGACTTGTCTAACTTCGAAATGCTTGAGACCAAATCAGGTGCCGATGGAATGGACAAAGTACCAGTGGGTCATTGA 831 0.4152 MGSGKVGACEECTLKCMSIHDRKDPLPVVTSFFKIMIGDRFSRALFVPPQFAQTLASSVDQKIYLEDRNGQRWRVTLSTLDGSLAFQQGWHEFALDHCLEIGDFVVFKYIIGSHFVVHIYGKSGCEKVNFFEKGNNSKGKRTRPKNSLDHLPSDVRNSKATEGPCHTIDKASVNEQGSSSTVRSDSDIEIIQSKCNVKHVEKVPMDTDKTSHCDNSNTKSQPVSPVDYTEVPFYMIDRDPVDRQVAHGTSHFDLSNFEMLETKSGADGMDKVPVGH* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00299 276 SMART B3_2 32 123 IPR003340 GO:0003677
Eupl11g00299 276 ProSiteProfiles B3 DNA-binding domain profile. 30 123 IPR003340 GO:0003677
Eupl11g00299 276 CDD B3_DNA 31 120 IPR003340 GO:0003677
Eupl11g00299 276 Pfam B3 DNA binding domain 32 122 IPR003340 GO:0003677
Eupl11g00299 276 MobiDBLite consensus disorder prediction 133 156 - -
Eupl11g00299 276 SUPERFAMILY DNA-binding pseudobarrel domain 30 125 IPR015300 -
Eupl11g00299 276 PANTHER B3 DOMAIN-CONTAINING 31 198 - -
Eupl11g00299 276 Gene3D - 28 125 IPR015300 -
Eupl11g00299 276 MobiDBLite consensus disorder prediction 133 165 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00299 32 127 B3 DNA Binding Superfamily AT5G66980 37.000 1.43e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Eupl11g00299 B3 3.3e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00299 - - ming:122093704 277.33