Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00295 ATGGAGAATGGCTTCACTTCTCCTCGAACCGAAGCCTTTCCGGCCGGTCTTCGTGTTCTTGTTGTTGATGACGATCCAACTTGGCTGAAAATCCTTGAAAAGATGCTTCGAAAATGCTCTTATGAAGTAACTACATGCTGTTTGGCAAGAGATGCTCTGGACATGCTTCGTGAAAGAAAAGAGGGATTTGACATTGTAATTAGTGATGTTAACATGCCTGACATGGATGGTTTCAAGCTCCTTGAACATGTTGGGCTCGAGATGGATCTACCTGTCATCATGATGTCTGTTGATGGGGAAACTAGCAGGGTGATGAAAGGTGTTCAACATGGAGCATGTGATTATCTTCTTAAGCCTGTACGCATGAAAGAACTTAGAAATATATGGCAACATGTCTTTAGAAAGAAAATACATGAGGTGAAGGATATTGAAAGTTATGACAGCAACGAAGATATTCCGATGATAAGAAATGGATCAGATGATGGGATCTTACTAAGTGGGGGTGATCTGAGTTCAGCAAAGAAAAGGAAAGATATGGAAAACATAGAGCAGGATGATCTAGACTTCAATGATCCTTCTGCTGTGAAGAAGGCTAGAGTAGTTTGGTCTGTAGATCTTCATCAGAAATTTGTCAAAGCAGTAAATCAGATTGGGTTTGATAAAGTTGGTCCTAAGAAAATACTCGACTTGATGAATGTTCCTTGGTTGACGAGAGAAAATGTTGCTAGCCACCTGCAGAAATACCGCCTCTATTTGAGTAGGTTGCAGAAGCAAAATGATCCAAAGAGTTCTTTTGGTGGGATAACGCATTCAGATTTCACTTCCAAGGATCCTCCTGCAAGCTTTTGCCTTCAGAGATCGGTCACAATGCACCAAAACAATGCAGCTAGCAGCAGCTTTGGATATTCTGGCAATAATATACTTGTCCAAGATGTGGGCCCAGAAATCCATGAAGGCGATTTGAAGGGCATCATTTCATTCTTGCCAGTGACAGAACCCAAAAAATCTTTGACTGGTGATGTTTCTGATCCTCAGAAGGCAAGCAATAGTTCTCGAATGGGCTTCACTCATTCTTTTGGGTCACTTGGGCTAGATGTCAATTATAAGTCCACTATCCCACAGCAACACTCTTGGTGTACCGAAATTCCACTGATGCAGTTTACGGAACAACCAAAACAGGAGCATGAACCGTATGGATACACTCATCTGCCATTGCCTGGTCCACAGCATCACATCCAAGCTGATCAAATACAACCCACTTCATTCATTACTCCTGGAACTTCTATTACACAAAAAGATATGGCGCCCCCCTCTGAAATCAAGATTTTGTGTACCGAATACAGAAGCAACCATGTCAGAAATGTATCTCCAATAGTACGCACACTCGACTCATTTTCTGTTCAAGCTGAGACAAAGATTGTAAATCCTCAAGATTTTGGGCCCATGCCCACCATTATTGAGTCACCAAGCATGAAAAATCATGGTATTGTTCATAATTGCACAAGTAATTGGGAGTCTGACCAACAAAACTTAATTCCAGGAAGTGGGTCAACTTTTCCCCTGCAACTCTGTTCACTTCAAGATTTTGGTTGTATTGAGAATCTTGGTCTCAACAGCATTGAAGTTTTGGATTACCATGATACAGAGCTCATTACTGAACTTCCAAGTCACTTGTACGACAGACTGAAGTTTAACTGTGATTTTCTCTGTGACTCAATGGAGTATCCTAAAATGGATCAAGGTCTATTCATAGCTTGA 1758 0.413 MENGFTSPRTEAFPAGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCCLARDALDMLRERKEGFDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHVFRKKIHEVKDIESYDSNEDIPMIRNGSDDGILLSGGDLSSAKKRKDMENIEQDDLDFNDPSAVKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKQNDPKSSFGGITHSDFTSKDPPASFCLQRSVTMHQNNAASSSFGYSGNNILVQDVGPEIHEGDLKGIISFLPVTEPKKSLTGDVSDPQKASNSSRMGFTHSFGSLGLDVNYKSTIPQQHSWCTEIPLMQFTEQPKQEHEPYGYTHLPLPGPQHHIQADQIQPTSFITPGTSITQKDMAPPSEIKILCTEYRSNHVRNVSPIVRTLDSFSVQAETKIVNPQDFGPMPTIIESPSMKNHGIVHNCTSNWESDQQNLIPGSGSTFPLQLCSLQDFGCIENLGLNSIEVLDYHDTELITELPSHLYDRLKFNCDFLCDSMEYPKMDQGLFIA* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00295 585 MobiDBLite consensus disorder prediction 335 354 - -
Eupl11g00295 585 SMART REC_2 17 129 IPR001789 GO:0000160
Eupl11g00295 585 CDD REC_typeB_ARR-like 19 133 - -
Eupl11g00295 585 Gene3D - 194 256 - -
Eupl11g00295 585 SUPERFAMILY CheY-like 16 140 IPR011006 -
Eupl11g00295 585 Gene3D - 17 177 - -
Eupl11g00295 585 ProSiteProfiles Response regulatory domain profile. 18 133 IPR001789 GO:0000160
Eupl11g00295 585 SUPERFAMILY Homeodomain-like 195 254 IPR009057 -
Eupl11g00295 585 FunFam Two-component response regulator 193 256 - -
Eupl11g00295 585 Pfam Myb-like DNA-binding domain 199 249 IPR001005 -
Eupl11g00295 585 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 326 IPR045279 GO:0009736
Eupl11g00295 585 FunFam Two-component response regulator 17 169 - -
Eupl11g00295 585 NCBIfam myb-like DNA-binding domain, SHAQKYF class 197 250 IPR006447 GO:0003677
Eupl11g00295 585 Pfam Response regulator receiver domain 19 128 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00295 Eupl-Chr11 3827261 3838847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00295 11 255 Response Regulator Gene Family AT2G25180 59.036 2.50e-82 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Eupl11g00295 Response_reg 2.9e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00295 K14491 - nnu:104593282 766.918