Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00283 ATGGCTCCTAGTATCCACATGCCAAATGAATTCTACAATGAAGAGAAGAGTGTTGAGATGGGAGGTCTTGATCACAGTCTTTCAGCCATGGCTTTCTATCCCTTCCCTTATCTACCCACATTGGAGAACTGTGGCTCCACCTGGTTCCTTCCCTCCTCAGATAACACAAGGAACCATAAGAGGATCAAGCTGATGCAAAGTGGTGATGAATCAATTGGAAATCATAATAATAATAATAGTCTTTATAGTGGTGGCGGCGGCATTATCGGTCGCAGCAATAGTACTAATTGCTTGAATAGCTTGCCGAGGCTTCAGTTCCGGGATCACATATGGACTTATACTCAACGATTCCTGGCAGCTGAGGCTGTGGAGGAGGCAGCAGCAGCCATGATTGGAGGTGATGGGGATGGAGTTGAGGATGAAGGGAGCAGCGATGGGATGAGGTTGGTGCAATTACTCATTGCCTGTGCCGAGGCTGTGGCCTGTCGTGACAGGTCACATGCGTCGGCACTGTTGTCTGAGCTTCGGGCTAATGCTTTGGTCTTTGGCACTTCCTTCCAGCGTGTCGCTTCTTGCTTTGTTCAAGGCCTTGCCGATCGCCTCGCACTGGTTCAACCACTTGGGGCGGTCGGCGTTGTAGCCCCGACGATGAATTCGATGGCTGTTGCCTCGGAAAAAAGGGAAGAGGCGTTACGCCTTGTTTATGAGGTTTGCCCACACATTCAATTCGGTCACTTTGTGGCAAACGCTTCAATCTTGGAAGCCTTTGAGGGAGAGAGTTTTATTCATGTGGTTGACTTGGGCATGTCCTTGGGCCTACCACATGGACACCAATGGCGCAGGCTGATCCACAGTCTCGCTAATCGCGCAGGCCAACCTCCTCGCCGTCTTCGTATAACTGGCGTCAGCCATTGTGCTGACCGCCTCCAAACCATCGGCGATGAGTTAGAGGTCTATGCACAAAGCTTGGGAATAAATTTCGAGTTCTCAGTAGTGGAAAGCAACTTAGAGAATCTGAAGCCTGAGGACTTCAAGCTCCTCGAAGGCGAGGTCCTCGTTGTAAATAGCATCCTTCAGTTGCATTGTGTAGTGAAAGAGAGTCGAGGAGCACTTAACTCAGTCCTACAGATAATTCACGAGCTCGCGCCGAAGGTTCTAGTTCTAGTCGAGCAGGACTCAAGCCATAATGGACCATTCTTTCTAGGGAGGTTCATGGAAGCATTGCATTACTACTCAGCAATCTTCGACTCACTCGATGCCATGTTGCCCAAGTACGACACAAGGCGTGCCAAGATAGAACAATTCTACTTCGCAGAAGAGATAAAGAACATAGTTAGCTGCGAGGGACCAGCGAGGGTCGAACGACATGAAAGGGTCGATCAGTGGCGCAGGAGGATGAGCCGAGCTGGGTTTCAACCTGCACCCATTAAGATGATGACACAGGCCAAGCAATGGCTAGGGAAGGTTAAGGTTTGCGAAGGATATACGATTGCCGAAGAGAAGGGCTGCTTGGTTCTTGGGTGGAAATCGAAGCCGATCGTCGCGGCTTCTTGCTGGAAATGCTAA 1566 0.5 MAPSIHMPNEFYNEEKSVEMGGLDHSLSAMAFYPFPYLPTLENCGSTWFLPSSDNTRNHKRIKLMQSGDESIGNHNNNNSLYSGGGGIIGRSNSTNCLNSLPRLQFRDHIWTYTQRFLAAEAVEEAAAAMIGGDGDGVEDEGSSDGMRLVQLLIACAEAVACRDRSHASALLSELRANALVFGTSFQRVASCFVQGLADRLALVQPLGAVGVVAPTMNSMAVASEKREEALRLVYEVCPHIQFGHFVANASILEAFEGESFIHVVDLGMSLGLPHGHQWRRLIHSLANRAGQPPRRLRITGVSHCADRLQTIGDELEVYAQSLGINFEFSVVESNLENLKPEDFKLLEGEVLVVNSILQLHCVVKESRGALNSVLQIIHELAPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQPAPIKMMTQAKQWLGKVKVCEGYTIAEEKGCLVLGWKSKPIVAASCWKC* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00283 521 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 121 515 IPR005202 -
Eupl11g00283 521 ProSiteProfiles GRAS family profile. 140 520 IPR005202 -
Eupl11g00283 521 Pfam GRAS domain family 149 520 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00283 Eupl-Chr11 3718365 3719930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00283 146 521 GRAS Transcription Factor Family AT1G66350 37.270 4.45e-80 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl11g00283 GRAS 1.7e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00283 - - vvi:100263271 780.785