Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00271 ATGTATTTGTCCGAGAAGCCTCGTCCGGTTGATTTTTATAAGGAGGAAGGGAGAGACATGATGATTGAAGTTGTTGGCAATGGCGGGTTGCAGCCTCAGCAACAGCAACAGCAACAGCAACAGCAGCAGCAGCAGATGATTCTTGGCGAAAGCAGTGGGGAAGACCATGAGGTGAAGGCTCCCAAGAAACGGGCAGAGACTTGGGTTCAGGAGGAAACTCGAAGCCTCATCAGTTTTCGGAGAGAAGTGGACGGGCTTTTCAATACTTCGAAGTCGAACAAGCATCTTTGGGATCAGATTTCTTCGAAGATGAGGGAGAAGGGTTTCGATCGGTCACCAACTATGTGCACTGATAAGTGGAGGAACCTGTTGAAGGAGTTCAAGAAGGCAAAGCATCAAGACAGAGGGAGTGGTTCGGCAAAAATGTCGTACTACAAAGAACTAGAGGAATTACTCAGGGAGAGGAACAAGAATACTTCTTACAAGAGTCCAACTCCTTCCAAAGTTGATACCTACATTCAATTCGCGGACAAAGGTCTTGAAGATACCAGTATTCCATTTGGATCTGTGGAAGCTAGTGGCAGGTCAACTCTCAATCTCGAAAGGCGTTTGGATCACGATGGACACCCTCTTGCTATCACAGCAGCTGATGCAGTTGCAGGCGGTGGAGTTCCCCCATGGAACTGGAGAGTGACTCCTGGAAACGGTGGGGAGAGCCAGTCTTCTTATGGTGGGAGGGTTATTTCAGTCAAGTTCGGGGACTTTACTAGAAGGATCGGTATCGATGGCACTGCAGATGCAATAAAGGAGGCAATCAAGTCCTCTTTTGGATTAAGAACCAAACGTGCATTTTGGTTAGAGGATGAAGATGAGGTTGTTCGGAGCTTTGACAGAGACATGCCATTGGGAACTTACATTCTTCATCTTGATGAGGGATTGATGATAAAAGTTTGCATCTATGATGAATCCGATCGCATACCCGTTCGTACTGAAGAGAAGACGCTTTACACTGAAGATGATTTCCGTGATTTCCTCACTCGTCGTGGTTGGACTGGTTTTAGAGAGTTGAGTGGCTTCAGAAGCGTTGATACTTTTAATGATCTCCGTTCTGGAGCAATCTACCAGGGTGTGAGACTGCTGGGCGACTAG 1149 0.47 MYLSEKPRPVDFYKEEGRDMMIEVVGNGGLQPQQQQQQQQQQQQQMILGESSGEDHEVKAPKKRAETWVQEETRSLISFRREVDGLFNTSKSNKHLWDQISSKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSAKMSYYKELEELLRERNKNTSYKSPTPSKVDTYIQFADKGLEDTSIPFGSVEASGRSTLNLERRLDHDGHPLAITAADAVAGGGVPPWNWRVTPGNGGESQSSYGGRVISVKFGDFTRRIGIDGTADAIKEAIKSSFGLRTKRAFWLEDEDEVVRSFDRDMPLGTYILHLDEGLMIKVCIYDESDRIPVRTEEKTLYTEDDFRDFLTRRGWTGFRELSGFRSVDTFNDLRSGAIYQGVRLLGD* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00271 382 Gene3D - 68 130 - -
Eupl11g00271 382 CDD GT1 66 131 - -
Eupl11g00271 382 MobiDBLite consensus disorder prediction 28 50 - -
Eupl11g00271 382 ProSiteProfiles Myb-like domain profile. 60 124 IPR001005 -
Eupl11g00271 382 PANTHER FI21293P1 34 352 - -
Eupl11g00271 382 Pfam Myb/SANT-like DNA-binding domain 67 151 IPR044822 -
Eupl11g00271 382 SMART sant 64 126 IPR001005 -
Eupl11g00271 382 MobiDBLite consensus disorder prediction 27 65 - -
Eupl11g00271 382 FunFam trihelix transcription factor GT-1 68 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00271 Eupl-Chr11 3516135 3530899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00271 19 378 Trihelix Transcription Factor Family AT3G25990 65.054 3.09e-172 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl11g00271 Myb_DNA-bind_4 8.3e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00271 - - nnu:104591637 660.603