Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00269 ATGAAAAGTGTCTCCATTGAATCTGTTTTCCAGGCAATAACTTGGGTTTTAGTAACAGTATTCGCAATCTATCACAAGAACAGAACAGTTAGAGAAGACAAGAAGTGGCCTTCAGTTCTCATTTTCTGGTGGATATTTTCCAGCATTCTCAATACTTTCTCTGTCTCCGTCTACCTTATCATCCATTTGAAACTTAAGCATTTGCCAGATTTCTTCCCGGAGGCTAATTTCGCAGATTTTGCTTCCTTTCCCCTGTCCATACTGCTCTGTTTCAATGCTCTCCATTTCAATTACAACAAAAAACTCCAAGAAATCGAGCGTCCACTACTTCGAAAAGAGGATGACAATGGCAACGTTGATGCTCTCAGTAATGCTGGAATTTGGAGTCGACTTACTTTCCGATGGCTAAACCCGCTCTTCGAAAAGGGTCGGACTCTAAAACTCGAACTACACCATATTCCTTCAGTTCCCGAATCCGAAACAGCAGAGAAATCTTTCTCCTTGTTACAAGAATCACTTCGGAATCAGAAAACCAAAGATTTCTCTCTGCCCAGAGCTATAATCCATGCTATATGGCGACCTCTGGCAATAAATGCAGTTTTTGCAGGTATAAACACAATTGCTTCCTTCATGGGTCCTTTCTTAATCACAAACTTTGTCAATTACTTGTCGGGAAAACGTGATGACTCAAGCCACCGATATGGACTTATTCTTGTAATATTTTTCTTCTTCGCAAAGACGGTGGAATCACTGTCCCAGCGACAATGGTACTTTGGTGCTCACCGGATTGGTATTCGAGTCCGAGCAGCTCTTCTGGTCTCAATCTACAAGAAATCTCTTTCAATCAAGTACTCTGATCCGAGCAATGGCAACATTGTAAATTTTATCAATGTGGATGTTGAGAGGATTGGAGACTTCTGCTGGTATATTCATGGAGTCTGGTTGCTTCCTGTCCAGGTCTTTCTAGCTCTGGCTATCCTGAACAGGAACCTTGGTGGGAGGCCCTCCATTGCCGCCCTCTTAGCCACAATTTTGGTGATGGTGAGCAACACCCCATTAGCCAATTTGCAGGAAAGGCTCCACTCTAAGATCATGAAAGCTAAGGATTCAAGAATCAAAACTACTTCAGAGACTCTGAAAAGCATAAGAATCTTGAAGCTGCATTCTTGGGAAACCACCTACTTGGAGAATATCCTAAATCTTAGAGAGACGGAGAAAAGTTGGTTGAAAAAGTATCTCTATATATGTGCAGCCGTTGCCTTTCTCTTTTGGACTTCACCAACTTTAATTTCAGTCATCACTTTTGGTGTTTCAATAATAGTAAAAACACCATTAACATCCGGTACGGTTCTCTCAGCTCTAGCCACTTTTCGAATACTACAAGAACCCATATATAATCTCCCAGAACTCATTTCCATGATCGCTCAAACGAAGGTCTCGATCGATCGGATCCAAGACTTCATCAGGGAAGAAGATCAAAAGAAGCTGATGCCCAATTATACTCCAAAAGCATCCGATGTCTCAATAGAGATCGGGACAGGGGAATACATGTGGGAAACAATTAATCTGAATGTGAAGAAACCCACAATCAAAATCACTGAGAACATAAAAATCATGAAAGGTGACAAGGTCGCAGTGTGTGGGTCCGTCGGGTCAGGGAAATCAAGCTTACTCTGCAGTATACTTGGCGAGATTTCAAGGATTTCTGGGGCAGGAAGTAAGGTGTATGGTTCAAAAGCTTATGTGCCGCAGAGTGCTTGGATTCAGACGGGTACAGTTCGAGAGAACGTGTTATTTGGTAGGGAAATGGAGAAAGATTTCTATGAGGATGTTTTGGATGGATGTGCTTTGAACAGGGATATTAGGATGTGGGTTGACGGAGATTTAAGTGTGGTGGGAGAGAGGGGGATGAATCTGAGTGGAGGGCAGAAGCAGAGGATTCAGCTGGCGCGAGCCATCTATAGTGATTCGGATGTTTATCTACTAGATGATCCTTTCAGCGCAGTGGATGCACACACGGGAGCACATCTTTTCAAGGAATGTCTAATGCGACTCTTGTCTCAGAAGACTGTAATTTATGTTACCCATCAATTGGAATTCTTGGATGCTTCTGACCTTGTTCTGGTAATGGACGATGGGAGGATTGTTCAGTCAGGAAAATATGAAGATCTAATTGCAGACCCTGATGGCGAGCTTGTCAGACAAATGGTCGCTCACAGACAATCTCTAAGACAAGTAACCCCACTCCAAGACTACAGATTCTTAACCTGTGAACACCATCAGATGAATCAAATTGAGCTCACAGAAGAAAATGATGATCCCAACAGTAGAGGAAAATTTTCTGAGAGAATTCACGAAGAAGAAACAGAATCCGGTAGAGTGAAATGGCGAGTTTACTCAATCTTCATGACCTCCGCTTATAGAGGAGCTCTTGTTCCAGTGATCCTTCTCTGTCAAGTTCTCTTCCAGGGATTACAGATGGGCAGCAATTACTGGATCGCTTGGGCAACGGAGGAGGAAGGGAGGGTAAGCAAACAGAAGTTGATAGGAGTATTTGCTTTTTTGTCTGGTGGGAGCTCCATATTCATACTGGGAAGAGCTGTTTTGCTTGCAACCATAGCTATTGAGACTTCTCAGAAGCTCTTCCTTGGCATGATTAACGCCGTTTTCCACGCACCCATTTCATTCTTCGACTCCACTCCTTCGAGCCGAATACTCAACAGGTCAACAACAGACCAGAGCACAGTGGACACAGACATTCCCTACAGACTGGCAGGATTGGCATTTGCTCTTGTTCAGCTCTTGAGCATCATCATCCTTATGTCTCATGTTGCCTGGCAGGTCTTCCTTCTCTTCCTTGCCATTCTTGCTATCTCCATATGGTATCAGGCTTACTACATCACCACAGCCAGAGAACTAGCCAGGATGGGTGGCATTAGAAAATCTCCAATCCTGCACCACTTCTCTGAGTCCATTGCCGGAGCAGCATTGATCCACTGCTTCAATCAGGAAGATCGCTTCCTGGCGAAAAATCTCAACTTGATTGATGATTACTCTCGTCTCACTTTCCACAATTCTGCTACGATGGAATGGCTGTGTGTTCGAATCAACTTTCTTTTCAATCTTGTTTTCTTCCTTGTTCTAATTATCTTGGTGACCCTGCCAAGGGAAGCCATTTACCCTAGCTTGGCAGGACTAGCAGCTACATATGGTCTGAACCTAAGTGTTCTACAGGCTTGGGTGATATGGAACCTCTGCAACGTCGAGAACAAGATGATCTCAGTAGAGAGAATTCTTCAGTTCTCGAACATTCCAAGTGAAGCTCCATTGGAAATTGAAGGGTGTAGACCAGAACCTGAGTGGCCAGTGAATGGAACTATCGAGCTCAATAATCTCCATGTCCAATACAGTCCTCTGCTCCCCATGATTCTCAGAGGCGTCACTTGCACATTCCCGGGACAGAAGAAGATTGGAGTGGTTGGCAGGACGGGCAGTGGCAAGTCCACCTTCATCCAAGCTCTATTTAGGGTAATAGAGCCCTCAGAAGGAAGGATCCTGATTGATGGAGTAGATATTTGTAAGATGGGTTTGCGGGATTTGAGGTCTAGATTGAGTATAATTCCACAAGACCCAACTCTGTTTCAAGGGACCATGAGAACTAATCTGGATCCTCTAAATCAGCATTCAGATTCAGAAATCTGGGAGGCTCTAAATAAGTGTCGGCTTGAGAAGATAGTTAGGCAAGATTGGAGACTTCTTGATGCACCAGTTGCAGAAGATGGAGGGAACTGGAGTGTGGGACAGAGGCAGTTGGTTTGCCTAGCTAGGGTGTTGCTAAAGAAGAGAAGGATTCTGGTGTTGGACGAGGCTACTGCTTCAGTGGACACTGCAACAGATAATGTAATTCAGAAGACAATAAGAGAAGAAACCAGTAGCTGCACTGTCATCACTGTGGCTCACCGAATACCCACTGTGATTGACAATGACCTGGTTCTGGTGCTTGATGAAGGCAAAGTTTTAGAGTATGACTCCCCAGCTCAGTTACTCAAAGATAATTCATCCGCATTCTCAAAGTTAGTGATGGAGTTCTTAAAGAGATCATCCGAGAGTAATCCTCATTTGACCCCAACTTGA 4134 0.4395 MKSVSIESVFQAITWVLVTVFAIYHKNRTVREDKKWPSVLIFWWIFSSILNTFSVSVYLIIHLKLKHLPDFFPEANFADFASFPLSILLCFNALHFNYNKKLQEIERPLLRKEDDNGNVDALSNAGIWSRLTFRWLNPLFEKGRTLKLELHHIPSVPESETAEKSFSLLQESLRNQKTKDFSLPRAIIHAIWRPLAINAVFAGINTIASFMGPFLITNFVNYLSGKRDDSSHRYGLILVIFFFFAKTVESLSQRQWYFGAHRIGIRVRAALLVSIYKKSLSIKYSDPSNGNIVNFINVDVERIGDFCWYIHGVWLLPVQVFLALAILNRNLGGRPSIAALLATILVMVSNTPLANLQERLHSKIMKAKDSRIKTTSETLKSIRILKLHSWETTYLENILNLRETEKSWLKKYLYICAAVAFLFWTSPTLISVITFGVSIIVKTPLTSGTVLSALATFRILQEPIYNLPELISMIAQTKVSIDRIQDFIREEDQKKLMPNYTPKASDVSIEIGTGEYMWETINLNVKKPTIKITENIKIMKGDKVAVCGSVGSGKSSLLCSILGEISRISGAGSKVYGSKAYVPQSAWIQTGTVRENVLFGREMEKDFYEDVLDGCALNRDIRMWVDGDLSVVGERGMNLSGGQKQRIQLARAIYSDSDVYLLDDPFSAVDAHTGAHLFKECLMRLLSQKTVIYVTHQLEFLDASDLVLVMDDGRIVQSGKYEDLIADPDGELVRQMVAHRQSLRQVTPLQDYRFLTCEHHQMNQIELTEENDDPNSRGKFSERIHEEETESGRVKWRVYSIFMTSAYRGALVPVILLCQVLFQGLQMGSNYWIAWATEEEGRVSKQKLIGVFAFLSGGSSIFILGRAVLLATIAIETSQKLFLGMINAVFHAPISFFDSTPSSRILNRSTTDQSTVDTDIPYRLAGLAFALVQLLSIIILMSHVAWQVFLLFLAILAISIWYQAYYITTARELARMGGIRKSPILHHFSESIAGAALIHCFNQEDRFLAKNLNLIDDYSRLTFHNSATMEWLCVRINFLFNLVFFLVLIILVTLPREAIYPSLAGLAATYGLNLSVLQAWVIWNLCNVENKMISVERILQFSNIPSEAPLEIEGCRPEPEWPVNGTIELNNLHVQYSPLLPMILRGVTCTFPGQKKIGVVGRTGSGKSTFIQALFRVIEPSEGRILIDGVDICKMGLRDLRSRLSIIPQDPTLFQGTMRTNLDPLNQHSDSEIWEALNKCRLEKIVRQDWRLLDAPVAEDGGNWSVGQRQLVCLARVLLKKRRILVLDEATASVDTATDNVIQKTIREETSSCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPAQLLKDNSSAFSKLVMEFLKRSSESNPHLTPT* 1378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00269 1377 Pfam ABC transporter transmembrane region 196 463 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl11g00269 1377 Pfam ABC transporter transmembrane region 832 1054 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl11g00269 1377 FunFam ABC transporter C family member 10 179 492 - -
Eupl11g00269 1377 Gene3D - 503 751 IPR027417 -
Eupl11g00269 1377 SUPERFAMILY ABC transporter transmembrane region 813 1107 IPR036640 GO:0005524|GO:0016020
Eupl11g00269 1377 FunFam Multidrug resistance-associated protein 4 495 753 - -
Eupl11g00269 1377 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 814 1090 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl11g00269 1377 CDD ABCC_MRP_domain1 509 714 - -
Eupl11g00269 1377 FunFam ABC transporter C family member 3 1110 1362 - -
Eupl11g00269 1377 SMART AAA_5 1153 1344 IPR003593 GO:0016887
Eupl11g00269 1377 SMART AAA_5 540 714 IPR003593 GO:0016887
Eupl11g00269 1377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1119 1353 IPR027417 -
Eupl11g00269 1377 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 123 1365 - -
Eupl11g00269 1377 FunFam ABC transporter C family member 5 776 1108 - -
Eupl11g00269 1377 CDD ABC_6TM_ABCC_D1 197 484 IPR044746 GO:0140359
Eupl11g00269 1377 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 516 737 IPR003439 GO:0005524
Eupl11g00269 1377 CDD ABCC_MRP_domain2 1125 1345 - -
Eupl11g00269 1377 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 196 476 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl11g00269 1377 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1127 1361 IPR003439 GO:0005524
Eupl11g00269 1377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 535 727 IPR027417 -
Eupl11g00269 1377 SUPERFAMILY ABC transporter transmembrane region 189 492 IPR036640 GO:0005524|GO:0016020
Eupl11g00269 1377 CDD ABC_6TM_ABCC_D2 812 1102 IPR044726 GO:0140359
Eupl11g00269 1377 Gene3D ABC transporter type 1, transmembrane domain 164 495 IPR036640 GO:0005524|GO:0016020
Eupl11g00269 1377 Gene3D ABC transporter type 1, transmembrane domain 776 1108 IPR036640 GO:0005524|GO:0016020
Eupl11g00269 1377 Gene3D - 1110 1363 IPR027417 -
Eupl11g00269 1377 Pfam ABC transporter 535 666 IPR003439 GO:0005524
Eupl11g00269 1377 Pfam ABC transporter 1144 1292 IPR003439 GO:0005524
Eupl11g00269 1377 ProSitePatterns ABC transporters family signature. 639 653 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00269 Eupl-Chr11 3497889 3505304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00269 527 753 Calmodulin-binding Proteins AT2G36910 28.099 1.12e-18 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00269 - - nnu:104592959 2106.64