Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00254 ATGGCGGAACCCAAACTCAATCTTTCGATCGATCCAAAGAGTGGTTTCTGCTCAGAAACGAAGATCTTTTATAGTCCCAGACCTTTCGTTGACCTACCGCCGGAAAACGTCCCTCTGTCAGCCGTTGAGTACGCCTTTTCCCTGTTCCGCAGCTTTTCCGAACCGGAAATCACCGGATTGATCGATTCCACCACCGGGCATTGCCTCTCCTACTCCGAATTTATCCACCAGACTGAAACCCTAGCTGCTTCTCTGCGAAACCAAATCGGCCTCTCCAGAGGTGACACCGCCTTCGTACTCCCTCCAAACTGTCTTCAAGTCCCAGTCCTCTACTTCTCTCTCCTTTCCCTCGGCGTAGTAATCTCTCCCTCCAACCCGACCAGCACGAAATCTGAAATTTCCCGCCAAATTGAGCTATGCAAAGCAGTTATTGCCTTCGCCACCTCCGCCACCGCTCACAAGCTCCCTTCTCTCCGCCACCAAACTATTCTCCTTGACTCGTCCCACTTCCACTCCATGATGACTATTCCGAGATGGAAATTCGATAGAATCGAGTGTGAGATCGGTAGCATTGGGGGAAAGTGTAGTGTTGATGAGAGGATGGATGTTCGGAGGATGCTGAGAGTCGTTGATGAGTTTAAGGTTACGCATATGGCAGTGGCCCCACCAGTGGTGGTGGCAATGGCTAAACAAGATTCTGTGATGGGCGGCTACGATTTGAGGTCGTTGGAGTCTGTTGCATGCGGCGGAGCTCCGCTTGGGAAGGAAGTGATCGAACTTTTCAAGGAACGGTTTCCCAATGTCCTTCTGGTGCAGGGGTATGGATTGACTGAATCAACTGGGGCTGCATTCCGATTAGTGAGTCTAGAAGAAAGTCGTCGATACGGTTCAGCAGGGCGACTTGCAGCGAATTGTGAAGCAAAGATCATAGATCCTGATACTGGCATTGCATTGCCCCCATGCAAGGAAGGGGAGCTTTGTATTAGAGGCCCAATAATCATGAAGGGTTACGTTGGCGATAAAGAGGCGACTTCTGGTACTTTGGACTCGGAGGGATGGTTGAAGACCGGCGACCTTTGTTATATTGACATCGATGGTTTCCTATTCGTCGTGGATAGGTTAAAGGAATTAATTAAATATAAGGGGTACCAGGTTCCGCCAGCAGAATTGGAACAATTGCTTCAATCGCACCCAGATATCGTTGACGCCGGTGTGATTCCATATCCTGATGAAGAAGCGGGTCAAGTGCCCATGGCATTTGTGGTGAGACGACCTCAGAGTGCCCTCAACGAATCCCAACTCGTAGATTTCGTTGCCAAACAGGTTGCACCTTACAAGAAGATAAGACGAGTATCGTTCCTTGATTCCATACCCAAGAATGCAGCGGGAAAGATATTGAGAAAGGAGTTAATGAAGCTAGCCCTCCAGATCCCTTCCCCTAAGTTATAA 1449 0.4941 MAEPKLNLSIDPKSGFCSETKIFYSPRPFVDLPPENVPLSAVEYAFSLFRSFSEPEITGLIDSTTGHCLSYSEFIHQTETLAASLRNQIGLSRGDTAFVLPPNCLQVPVLYFSLLSLGVVISPSNPTSTKSEISRQIELCKAVIAFATSATAHKLPSLRHQTILLDSSHFHSMMTIPRWKFDRIECEIGSIGGKCSVDERMDVRRMLRVVDEFKVTHMAVAPPVVVAMAKQDSVMGGYDLRSLESVACGGAPLGKEVIELFKERFPNVLLVQGYGLTESTGAAFRLVSLEESRRYGSAGRLAANCEAKIIDPDTGIALPPCKEGELCIRGPIIMKGYVGDKEATSGTLDSEGWLKTGDLCYIDIDGFLFVVDRLKELIKYKGYQVPPAELEQLLQSHPDIVDAGVIPYPDEEAGQVPMAFVVRRPQSALNESQLVDFVAKQVAPYKKIRRVSFLDSIPKNAAGKILRKELMKLALQIPSPKL* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00254 482 Gene3D - 30 182 IPR042099 -
Eupl11g00254 482 Gene3D - 183 375 IPR042099 -
Eupl11g00254 482 FunFam 4-coumarate--CoA ligase 2 376 476 - -
Eupl11g00254 482 Pfam AMP-binding enzyme C-terminal domain 389 464 IPR025110 -
Eupl11g00254 482 SUPERFAMILY Acetyl-CoA synthetase-like 60 476 - -
Eupl11g00254 482 Pfam AMP-binding enzyme 196 380 IPR000873 -
Eupl11g00254 482 Pfam AMP-binding enzyme 55 166 IPR000873 -
Eupl11g00254 482 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 192 471 - -
Eupl11g00254 482 Gene3D - 376 476 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00254 Eupl-Chr11 3269452 3275362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00254 10 482 Monolignol Biosynthesis Gene Families AT5G63380 42.857 2.19e-148 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00254 K01904 - pop:7477039 488.419