Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00247 ATGAGAGCTTCCTCGGCTATCTACTCTCCCAAGCTGTCGCCTCTACTAAGAGGACCTTTTTCAATCACAAGGACTCAAATTTGTTTTCCGCGACAAATCTTCTTCTGTCAGGCAAAGTCAGCAGAATCTGGGGTAGATGGATCTGTCAACTTCAAAATGGTGCCTTCAACCGTGTTAACTGCGGAAAAAGAAGAGGCCAAGGCTGTTTTAAACTTGTTTTTGAGAAAACAAGGTTTGAGCAATGCAGTTGCTGCAAGGACAATCAACAAGTCGGACCATTTTATTGACCACCTTGTATCAAGGCTCCATTCTGTTCATAAAACCTGGTATCTAGTAGGAAGAGAGCTTACCACCCTTGAGATCCGAGACGCACTTGTTCCGTACCTCAAATCCCTCCTTGAAGAACATGGAGACATTTTGATAGACGTGGTTGAAAACTTTCCAGACCCGCCTGGGAAAGAAAGACTTAGCACCCCAGCTTCTCCAACCAACGCATCTCTCAACTCCAAGAAACTAAAAGCCATGGCACGAGTGAGTGAGATGGGCCCTGATGGGCAGCTTCCCGCTCATGTACTCTACCTCATAGACTTCGGCATGCACCTCGACCAGATTAAGGGAATGACACGCAAGTTCCCGGCTTTTGCCTACTACAGCCTGGAGGGGAAAATCAAGCCTGTGGTGGAGTTCCTCCTTGACCTCGGGGTACCCCGACCAGACATCGCTACCATCCTATACAAAAGGCCTCAGTTATGTGGGATCAGTCTCTCTGAGAACCTGATACCCACCATGACATACTTAGAAAACTTGGGCGTGGACAAGAGAAAGTGGGCTAAGGTGATTTACCGGTTTCCAGCATTGCTCACATACAGCAGACAGAAGGTGAAGGCATCAGTTGACTACTTCTACGAACTGGGTCTGTCGCCAGAGAGCATAGGGAAGATTCTTACACGCTGCCCACACATTATAAGTTATAATGTGGATGATAATCTACGTCCCACAGCTGAGTACTTCTGCTCAATGGGAGTTGATGTTGCCGTTCTTCTCCACCGATCACCACAGACTTTTGGTTTAAGTATTGAGGCCAATTTGAAGCCTGTGACGGAGTTTTTCTTGGAGAGGGGATACACTATGGCAGAGATCAGGACCATGGTATCAAGATATGGAGCTTTATATACTTTTAGCCTGGAGGAGAACTTGATACCAAAGTGGAAATTCTTTTTAACCATGGATTATCCGAGGTCGGAGTTGGTTAAGTTCCCTCAGTATTTCGGGTACAGTTTGGAGGAGAGGATTAAACCAAGGTATGCGCGGGTGAGGGGGTGTGGGGTGAAGTTGTTGCTTAACCAGGTGTTATCTGTTTCTGATCGTGATTTTGAGAAAATCTTGAACAGGAAGATGAAGAAAATGCTAGATGGTCAGGCTCCTACAAGTGTATAA 1437 0.4628 MRASSAIYSPKLSPLLRGPFSITRTQICFPRQIFFCQAKSAESGVDGSVNFKMVPSTVLTAEKEEAKAVLNLFLRKQGLSNAVAARTINKSDHFIDHLVSRLHSVHKTWYLVGRELTTLEIRDALVPYLKSLLEEHGDILIDVVENFPDPPGKERLSTPASPTNASLNSKKLKAMARVSEMGPDGQLPAHVLYLIDFGMHLDQIKGMTRKFPAFAYYSLEGKIKPVVEFLLDLGVPRPDIATILYKRPQLCGISLSENLIPTMTYLENLGVDKRKWAKVIYRFPALLTYSRQKVKASVDYFYELGLSPESIGKILTRCPHIISYNVDDNLRPTAEYFCSMGVDVAVLLHRSPQTFGLSIEANLKPVTEFFLERGYTMAEIRTMVSRYGALYTFSLEENLIPKWKFFLTMDYPRSELVKFPQYFGYSLEERIKPRYARVRGCGVKLLLNQVLSVSDRDFEKILNRKMKKMLDGQAPTSV* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00247 478 SMART mt_12 277 307 IPR003690 GO:0003690|GO:0006355
Eupl11g00247 478 SMART mt_12 413 444 IPR003690 GO:0003690|GO:0006355
Eupl11g00247 478 SMART mt_12 381 412 IPR003690 GO:0003690|GO:0006355
Eupl11g00247 478 SMART mt_12 345 376 IPR003690 GO:0003690|GO:0006355
Eupl11g00247 478 SMART mt_12 312 343 IPR003690 GO:0003690|GO:0006355
Eupl11g00247 478 SMART mt_12 241 272 IPR003690 GO:0003690|GO:0006355
Eupl11g00247 478 SMART mt_12 205 236 IPR003690 GO:0003690|GO:0006355
Eupl11g00247 478 Gene3D Transcription termination factor 3, mitochondrial 248 468 IPR038538 -
Eupl11g00247 478 PANTHER CGI-12 PROTEIN-RELATED 160 464 IPR003690 GO:0003690|GO:0006355
Eupl11g00247 478 Pfam mTERF 128 302 IPR003690 GO:0003690|GO:0006355
Eupl11g00247 478 Pfam mTERF 293 459 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00247 Eupl-Chr11 3150122 3153300 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl11g00247 mTERF 1.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00247 K15031 - nnu:104591670 752.281