Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00240 ATGGCTTCTTTGAGTGCTCTATCTCTTTGCTCTTGCAAGCTTTCATGTCGATCAAATCGTAGAAAACCTTCCATTTCTTGCTCCATTGGTGCTCCTGCCATTACAGGTAACTGGGAGTTTAATATACCTCGAAAGAAATCTGGGAGAACAGAAAGGGCTGGGAAAAGTATGGAGGACTCTGTTCAGCGCAAAATGGAACAATTTTATGAAGGTTCTGATGGTCCACCACTCCGTGTTCTCCCTATTGGTGGCCTGGGTGAAATTGGGATGAATTGCATGCTTGTTGGGAACTACGATCGATATATTTTGATCGATGCAGGAATCATGTTTCCAGACTATGATGATCTTGGTGTCCAGAAAATTATTCCTGATACAACATTCATAAAAAAATGGAGCCATAAAATTGAAGCAGTTGTTATAACACATGGCCACGAAGATCACATTGGTGCGTTGCCTTGGGTTATCCCAGCTTTGGATTCCCATACACCAATATTTGCTTCATCCTTTACAATGGAGCTTATTAAAAAGCGTTTGAAGGAGTTTGGGATCTTTGTTCCATCTAGGCTTAAGGTATTTAGGACGAAGAAGAAGTTCTTTGCTGGGCCATTTGAAGTAGAGCCTATCAGTGTTACACATTCTATTCCCGATTGTTGTGGATTGGTGCTTCGATGTACTGATGGTACAATTCTTCATACTGGGGACTGGAAGATTGATGAATCACCATTGGATGGGAAAATTTTTGATCGTGAAGCTCTAGAGGAACTCTCGAAAGAAGGAGTTACATTAATGATGAGCGACTCAACAAATGTGCTCTCACCTGGAAGGACTATCAGCGAAACTGTAGTAGCAGATGCGCTGTTGAGACAAATATCAGCTGCTACAGGGAGAGTCGTTACTACTCAGTTTGCATCTAATATACATCGTCTTGGAAGTGTGAAAGCTGCAGCTGATTTAACCGGTCGGAAGTTGGTATTTGTTGGCATGTCATTAAGGACATACCTGGATGCTGCTTGGAGGGATGGAAAGGCACCAATTGATCCATCAACTCTGGTGAAAGTGGAAGATATTGATGCCTATGCTCCAAAGGATTTGCTAATTGTTACAACGGGCTCACAAGCAGAACCACGTGCAGCCCTGAACCTTGCATCATACGGAAGCAGTCATTCCCTCAAACTGACAAAGGATGATGTGATTTTATATTCAGCCAAGGTAATTCCCGGAAATGATACTCGAGTGATGAAAATGATGAACCGGATAGCGGAGCTTGGTTCCACAATTGTAATGGGAAAGAATGAAGGGTTGCATACATCTGGTCACGGATATCGTGGAGAACTGGAGGAAGTACTTAGGATTGTGAAGCCGCAGCATTTTCTACCCATCCATGGAGAACTCGTGTTCCTGAAAGAGCATGAATTACTTGGGAAATCAACTGGCATCCGGCATACAACTGTGATAAAGAACGGAGAGATGCTTGGAGTTTCACACCTGAGAAACAGAAAAGTTTTGTCCAATGGGTTTATTTCCTTGGGGAAGGAGAATTTGCAGTTGATGTATAGTGATGGCGATAAAGCATTTGGAACATCTACAGAACTTTGCGTTGATGAGAGATTAAGAATAGCGTTTGATGGCATTATTTTTGTCAGCATGGAAATTTTGCGTCCACAAAATAGAGATGACCAACATGAAACCAGCATAAAAGGAAAAATAAGAATCACCACACGTTGCTTATGGCTTGACAAAGGGAAGCTTGTAGATGCACTGCACAAAGCTGCCCATGCTGCACTATCTAGCTGTCCGGTAAACTGTCCACTAGCCCACATGGAACGAACAGTGTCTGAGGTATTGAGGAAGATGGTAAGGAAGTACAGTAGTAAAAGGCCTGAGGTCATTGCCGTTGCTGTAGAGAACACAGCAGTTCTCTCTGAGGAGCTGAAGGAAAGATTGTCTGGCAAGTCTCGTGTGGATTACAGGCCATCGGCTATGAGTAAAGTGGTTGATGCACATCCGAAAAACAGCAGGTTGAGTGGGAGGCTTGAGGAAGCAGGCAGGGTTTATCCCCACCAAGAAGAAGACACTATACAACAAGAGATCCAAGGTGAGGGTGTTGTTGAACGATTACCAACTGAGGAAGACATGACAATATCAAGTTCTGACTTGGCAGAGTCATCATCATTTGCCCAAGAAGACTCAGATGATTTCTGGAAATCATATGTAGTATCATCACCCGTTGAGCCCTTAATAAAAACAAAAAATGTTTCCATTCTGAAAGAACACTTGGAGCCCATGGAAGATGGAACTGAGAGTAGCGGGAAGGATTCTGTTGAATTATCAAGTCTTCAGGCAGCATCTTCCAAGCCTGTGAAACGGAACAGATGGAAACCCGAAGAGATTAAGAAACTAATCGAAATGCGTGGGGAATTTGATCGCAGATTTCAAGTTGTGAAGGGACGGATGGTCCTTTGGGAAGAGATATCTGCGAATTTGGTGGGTTATGGGATAAGTCGAACTCCAGGCCAGTGCAAATCTTGTTGGGCGTATTTGGTTCAGAAATACGAGGAAAGCGGGAGTGGTAAGAAAAGCAAGAGGGGTTGGCCTTACTTCGATGACGTGGACAATATATTATCTAATCGTGATGCAGCTGCCAATGGCAAAGGGGAGAAGCAACCATAG 2670 0.4341 MASLSALSLCSCKLSCRSNRRKPSISCSIGAPAITGNWEFNIPRKKSGRTERAGKSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGIMFPDYDDLGVQKIIPDTTFIKKWSHKIEAVVITHGHEDHIGALPWVIPALDSHTPIFASSFTMELIKKRLKEFGIFVPSRLKVFRTKKKFFAGPFEVEPISVTHSIPDCCGLVLRCTDGTILHTGDWKIDESPLDGKIFDREALEELSKEGVTLMMSDSTNVLSPGRTISETVVADALLRQISAATGRVVTTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWRDGKAPIDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLTKDDVILYSAKVIPGNDTRVMKMMNRIAELGSTIVMGKNEGLHTSGHGYRGELEEVLRIVKPQHFLPIHGELVFLKEHELLGKSTGIRHTTVIKNGEMLGVSHLRNRKVLSNGFISLGKENLQLMYSDGDKAFGTSTELCVDERLRIAFDGIIFVSMEILRPQNRDDQHETSIKGKIRITTRCLWLDKGKLVDALHKAAHAALSSCPVNCPLAHMERTVSEVLRKMVRKYSSKRPEVIAVAVENTAVLSEELKERLSGKSRVDYRPSAMSKVVDAHPKNSRLSGRLEEAGRVYPHQEEDTIQQEIQGEGVVERLPTEEDMTISSSDLAESSSFAQEDSDDFWKSYVVSSPVEPLIKTKNVSILKEHLEPMEDGTESSGKDSVELSSLQAASSKPVKRNRWKPEEIKKLIEMRGEFDRRFQVVKGRMVLWEEISANLVGYGISRTPGQCKSCWAYLVQKYEESGSGKKSKRGWPYFDDVDNILSNRDAAANGKGEKQP* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00240 889 Pfam Myb/SANT-like DNA-binding domain 789 873 IPR044822 -
Eupl11g00240 889 Gene3D - 81 493 IPR036866 -
Eupl11g00240 889 SUPERFAMILY Metallo-hydrolase/oxidoreductase 77 491 IPR036866 -
Eupl11g00240 889 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 434 479 IPR011108 -
Eupl11g00240 889 Gene3D - 792 853 - -
Eupl11g00240 889 MobiDBLite consensus disorder prediction 760 787 - -
Eupl11g00240 889 Gene3D - 278 428 IPR042173 -
Eupl11g00240 889 MobiDBLite consensus disorder prediction 771 785 - -
Eupl11g00240 889 Pfam Beta-lactamase superfamily domain 100 236 IPR001279 -
Eupl11g00240 889 ProSiteProfiles Myb-like domain profile. 784 848 IPR001005 -
Eupl11g00240 889 SMART Lactamase_B_5a 89 286 IPR001279 -
Eupl11g00240 889 SMART sant 788 850 IPR001005 -
Eupl11g00240 889 CDD GT1 790 854 - -
Eupl11g00240 889 CDD RNaseJ_MBL-fold 80 491 - -
Eupl11g00240 889 PANTHER RIBONUCLEASE J 1 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00240 Eupl-Chr11 3064128 3083126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00240 791 877 Trihelix Transcription Factor Family AT2G38250 35.955 2.73e-12 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl11g00240 Lactamase_B_2 8e-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00240 - - nnu:104592923 1368.6