LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl11g00232	ATGGATTACGTGATGGAAGCAGCTTCTGGTGCGCACTTCTCCGGTCTACGCCTCGAAGGCCTTCTCGATTCTTCTTCGTTGTGTGCTCCCCTATCAGACGACAACGCTCCCAAACAGCCATTCGTCATCGGAGTTTCGGGGGGTACGGCGTCAGGTAAGACCACTGTTTGCGATAGGATCATTCAACAGCTTCATGATCATCGCGTTGTACTTGTCAATCAGGATTCATTCTACCGTGGTTTGACTGCTGAAGAATCTGAACGTGTCCATGAGTATAATTTTGATCATCCTGACGCGTTTGACACTGAACAACTTCTTGAGTGCATTGGCAAGCTCAAGTGTGGGCAATCTGTCCATGTTCCAATTTATGATTTTAAGAATCATCGACGGTGTTCTGAAAGTTTTAGACAGGTAAATGCATCTGATGTCATTATTTTGGAGGGGATTTTGGTTTTCCATGACCAACGTGTCCGTGACTTGATGAATATGAAGATCTTCGTTGACACAGATGCTGATGTAAGGCTTGCCCGTAGAATAAGGCGCGACACAGTTGAGAGGGGTAGAGACGTAAACTCTGTTCTTGAACAGTATGCGAAGTTTGTAAAGCCTGCTTTTGATGATTTTGTTCTTCCATCAAAGAAATATGCTGATGTGATCATACCCCGAGGAGGTGATAATCATGTCGCGATTGACTTAATTGTGCAACATATTCGCACAAAGCTTGGTCAGCATGACATATGCAAAATATATCCCAATGTATATGTCATTCAATCAACATTCCAGATAAGAGGGATGCATACACTAATCAGAGACAGGGAGATATCAAAGCACGACTTTGTCTTTTATTCAGATCGGCTCATTCGTTTGGTTGTCGAGCATGGTCTTGGTCATTTGCCATTCACTGAGATGCAAGTAGTCACTCCTACAGGATCGGTGTATACAGGAGTTGACTTTTGCAAGAAATTGTGTGGAGTATCCATTGTTCGAAGTGGTGAAAGCATGGAGAATGCTTTGCGTGCATGTTGCAAAGGAATAAAAATAGGGAAAATCCTGATCCACCGTGATGGAGACAATGGGAAACAGCTTATATATGAGAAACTTCCCAAAGATATTTCAGAACGCCATGTCTTGCTTCTGGACCCAGTTCTTGCTACAGGTAACTCTGCAAACCAGGCGATTGAACTTCTCATACAGAAAGGAGTTCCGGAGTCTTACATTATTTTCCTCAACCTCATTTCTGCACCTGAAGGAATTCATTGTGTTTGCAAACGGTTCCCATCTTTGAAAATTGTGACTTCGGAAATCGATGTCGCATTGAATGAAGAGTTCCGTGTTATACCTGGGATGGGAGAGTTTGGTGATCGCTACTTCGGCACAGACGATTGA	1386	0.4343	MDYVMEAASGAHFSGLRLEGLLDSSSLCAPLSDDNAPKQPFVIGVSGGTASGKTTVCDRIIQQLHDHRVVLVNQDSFYRGLTAEESERVHEYNFDHPDAFDTEQLLECIGKLKCGQSVHVPIYDFKNHRRCSESFRQVNASDVIILEGILVFHDQRVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDVNSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDICKIYPNVYVIQSTFQIRGMHTLIRDREISKHDFVFYSDRLIRLVVEHGLGHLPFTEMQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESYIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGMGEFGDRYFGTDD*	462

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl11g00232	461	Gene3D	-	244	459	IPR029057	-
	Eupl11g00232	461	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	36	233	IPR027417	-
	Eupl11g00232	461	SUPERFAMILY	PRTase-like	243	460	IPR029057	-
	Eupl11g00232	461	Pfam	Uracil phosphoribosyltransferase	258	459	-	-
	Eupl11g00232	461	FunFam	Uridine kinase	37	243	-	-
	Eupl11g00232	461	PRINTS	Uridine kinase signature	70	81	-	-
	Eupl11g00232	461	PRINTS	Uridine kinase signature	115	130	-	-
	Eupl11g00232	461	PRINTS	Uridine kinase signature	40	57	-	-
	Eupl11g00232	461	PRINTS	Uridine kinase signature	208	221	-	-
	Eupl11g00232	461	PRINTS	Uridine kinase signature	172	182	-	-
	Eupl11g00232	461	PRINTS	Uridine kinase signature	186	197	-	-
	Eupl11g00232	461	FunFam	Uridine kinase	244	459	-	-
	Eupl11g00232	461	NCBIfam	uridine kinase	40	240	IPR000764	-
	Eupl11g00232	461	CDD	UMPK	42	240	IPR000764	-
	Eupl11g00232	461	Gene3D	-	36	243	IPR027417	-
	Eupl11g00232	461	PANTHER	URIDINE KINASE	34	370	-	-
	Eupl11g00232	461	Pfam	Phosphoribulokinase / Uridine kinase family	42	228	IPR006083	GO:0005524\|GO:0016301
	Eupl11g00232	461	CDD	PRTases_typeI	317	432	IPR000836	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl11g00232	Eupl-Chr11	2976521	2990573	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl11g00232	1	461	PRT Gene Family	AT5G40870	85.084	0.0	823

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl11g00232	K00876		-	msin:131239529	873.618