Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00230 ATGGTATCAACAAGGCGAAGCGGATCCCAGTCGACCAATAATAGCAAGAGATCTTTGTCTTCAGATGAGAAACCCTCATCGCCTAAGCGACAAAAGGTTGAAAATGGTTTTCTAGCGGAGAAATCGACGCAGACGTCGGGATCTTCAGAGAATTCGAAGGAATTGTGTTCTTCGCCGGCGCCAAATCCTATCGAATGCGCTCCAATTGATCCTCCGATCTCTGCCGGCGCTGTGGATTCTGACAAGGTGGTGGATGGGGGAAACGGGGAAGCAGAGGCGTCTTTGGTGTCGACACCAATCGCCGAGGAAGGGTCTTCGCCAATTGTGGATAGACCGAAGAGCTCTTTTATTCCGTGGAGTATTCAAAAGCAGAACCCGAATTTTGACACTTCGACTCCATGGTGCAAGTTTCTGTCGCAGTATTCACAGAACCCGCATGTTCTTATTTGCACACCTGTTTTCACCATTGGTTCAAGCAGACACTGCAACTTCTCTTTAAAGGACCAAACCATTAGTGCGACTCTATGCAAGATCAAGTACACACAGCGTGGTGGCAGTGTCATTGCTGTGCTTGAAAGCACAGGGAGCAAGGGGTCCGTGCAAGTTAATGGGAAGATTGTTAAGAAGAACACCAGCTCTGTTCTTTACTCTGGGGATGAGGTGATCTTCAGTTCGTTGGGGAACCATGCCTATATTTTCCAGCAACTTGCAACGGAGGCTGCGGCTAAGGTACCTTCATCAGCTGGCGTGGCGGAGGCTCAAAGCAGTGCAGGTAAAGGGCCGCACCTTGAAAGGAGGTCTGGGGACCCTTCGGCTGTAGATGGGGCTTCTATATTGGCATCTCTATCAAGTCTGAGACAAGATATATCATTTTTGACACCTCCAGCTCAAAATACCCGTGAAACCCAACCAGGGGCCGAGATGCCCTCTTGCTCTCTTGCTTGTGATGGTCCAGATATGGATCTTGATGGCCGGGAAACTAAAGTCAATTCTGATCCGAGTACAGGGAGTGATAAAGCTGCTGATGTTGGAGCAACCAGCAAAAGCCTTCATCTCGACAACATCCAAGATTCTGGCATGGAGTCAGACATTGTAAAGCTTTCTGGGGTGAATGATTCACTAAGGCCTTTCTTGCGGATGTTGGGTGGATCAACTAGTTGTGACCTGGAATTAAGCAAAAATATCTTTAAACAGGTATTGGATGAAGGAAAGGAATTGTCAAGGGATTCTCTGCCAGCATCAACATCAGGTGTTTTACCCAAATGTGCAGCACTCAAAGAAGATATTCATGCGGGGATTCTCGATGGGAGAGAAGTAGATGTCTCTTTCGATAATTTTCCGTACTATCTAAGTGAAAGCACGAAAAATGTGCTGATTACTGCTGTATATATACACCTGAAGCATAGAGAATATACAAAATATACCTCAGAACTTCCTACTGTGAGCCCAAGAATTCTGCTCTCAGGCCCTGCAGGATCTGAGATATATCAGGAGATGTTGTCAAAGGCACTTGCTAATCACTTTGGGGCTAAATTGCTAATATTTGATAGCCACTCATTTCTGGGTGGATTATCGTCAAAGGAAGTAGAGCTGCTGAAAGATGGATTACGAGCTGAAAAATCCTGCATTTTTGCGAAGCAAAATCCAGGAAATGCTGACTTGGTTAAGAGCACGACTCCTTCAGCTGGAGAAGAAGATACTCCCAGCTCTGCAAATCCACCATCTTCTTGCCGTATAGAATCTCAACCAAAGCTGGAAACAAATGCCACACCTTCCTCTTCTGTGACATCTAAGAACTATCTGTTCAAAGCAGGTGACAGAGTAAGATTTGTGGGTTTTACTTCTATTGGGTTATATCCAACGGCATTGCCTCCTTCAAGGGGGCCGGCTTATGGAAATCGGGGAAAAGTTCTGTTACCTTTTGAAGATAATCTTTTGTCCAAAATTGGTGTACGATTTGATAAACCTATTCACGAAGGGGTTGATCTTGGGGGTCTATGTGAAGGAACTCATGGATTCTTTTGCAATGTTAATGATCTTAGATTGGAAATGCCGGGTACAGAGGATTTAGACAAGTTACTCATCAACACATTGTTCGAGGTTGTATCCAGTGAAAGCAGAATTTCCCCTTTCATTTTGTTTGTGAAAGATGTTGAGAAGTCTATTGTAGGAAATTCGGAGTCATATTCAGCGTTTAAGAGCAAGCTTGAAAAGCTTCCTGATAATGTTGTAATAATTGGATCACACACCCAGAATGATAGTCGTAAGGAAAAGTCACACCCTGGAGGCCTTCTCTTCACAAAATTTGGAAGCAATCAAACTGCCCTCCTTGACTTTGCTTTTCCGGATAGTTTTGGGAGACTGCATGATAGAGGCAAGGAGGTTCCGAAAACAACAAAGCTATTGACTAAACTTTTCCCCAATAAAGTTACCGTGCATATGCCACAGGATGAGATCCTTCTTGTTGATTGGAAACATCAGTTGGATCGAGATGTTGAGACCCTTAAAGCAAAGGGAAATTTGATTCACCTCCGCACAGTTTTGAATCGCAGTGGCCTGGAGTGTGACGGATTTGAGACACTATGCATTAAGGATCAAACACTCACAAATGAAAGCGCAGAGAAGGTAATTGGATGGGCTCTATGTCACCATCTCATGCAAAACCCAGAAGCTGATGCAGAAGATGCAAAGCTTGTTTTGTCTAGAGAGAGCATCCAGTATGGGCTTGGAATTCTACTGGCTATCCAGAGTGAATCCAAGAGTTTGAAGAAGTCACTCAAGGATGTTGTAACTGATAACGAATTTGAGAAAAGACTCCTAGCTGATGTGATTCCACCTACCGATATTGGAGTAACGTTTGATGACATTGGAGCTCTCGAAAATGTCAAGGATACATTGAAGGAGTTGGTGATGCTTCCTTTACAGAGGCCCGAGTTATTTTGCAAGGGGCAACTAACAAAGCCTTGCAAGGGCATACTTTTATTTGGCCCCCCTGGAACAGGGAAGACAATGCTTGCAAAAGCCGTGGCCACTGAAGCTGGTGCAAACTTCATCAACATCTCAATGTCTAGCATCACATCTAAGTGGTTTGGTGAGGGTGAGAAGTATGTGAAGGCTGTTTTCTCACTAGCAAGTAAAATTTCTCCTAGTGTTATATTTGTTGATGAGGTTGATAGCATGTTGGGCCGCAGAGAAAATCCAGGAGAACATGAGGCCATGCGCAAGATGAAAAACGAATTTATGGTGAATTGGGATGGCTTACGCACGAAAGACAAAGAACGGGTTCTGGTACTTGCTGCCACAAATAGGCCTTTTGACCTTGACGAGGCTGTTATTAGAAGGTTGCCGCGTAGATTGATGGTAAATTTGCCAGACGCTCCAAATAGATCAAAGATCCTGAAAGTGATACTCGCAAAAGAGGACATATCGCCAGATGTTGATTGGGATGCAATTGCAAGTATGACGGATGGATATTCCGGAAGTGACCTCAAGAATCTATGTGTTACTGCTGCACACTGTCCAATCAGAGAGATATTGGAAAAGGAAAAGAAGGAGCGGGCCACAGCATTAGCAGAAGGCAGAACCCCTCCAGCTCTCAGTGGGAGTGAGGACGTTCGGCCTTTAAACATGGATGACTTCAAATATGCTCACGAACAGGTTTGCGCAAGTGTGTCGTCGGAGTCTGTAAACATGAGCGAGTTGCTGCAGTGGAATGAACTCTATGGGGAAGGGGGTTCCAGAAGGAAAAGGGCTCTCAGCTACTTCATGTGA 3771 0.4484 MVSTRRSGSQSTNNSKRSLSSDEKPSSPKRQKVENGFLAEKSTQTSGSSENSKELCSSPAPNPIECAPIDPPISAGAVDSDKVVDGGNGEAEASLVSTPIAEEGSSPIVDRPKSSFIPWSIQKQNPNFDTSTPWCKFLSQYSQNPHVLICTPVFTIGSSRHCNFSLKDQTISATLCKIKYTQRGGSVIAVLESTGSKGSVQVNGKIVKKNTSSVLYSGDEVIFSSLGNHAYIFQQLATEAAAKVPSSAGVAEAQSSAGKGPHLERRSGDPSAVDGASILASLSSLRQDISFLTPPAQNTRETQPGAEMPSCSLACDGPDMDLDGRETKVNSDPSTGSDKAADVGATSKSLHLDNIQDSGMESDIVKLSGVNDSLRPFLRMLGGSTSCDLELSKNIFKQVLDEGKELSRDSLPASTSGVLPKCAALKEDIHAGILDGREVDVSFDNFPYYLSESTKNVLITAVYIHLKHREYTKYTSELPTVSPRILLSGPAGSEIYQEMLSKALANHFGAKLLIFDSHSFLGGLSSKEVELLKDGLRAEKSCIFAKQNPGNADLVKSTTPSAGEEDTPSSANPPSSCRIESQPKLETNATPSSSVTSKNYLFKAGDRVRFVGFTSIGLYPTALPPSRGPAYGNRGKVLLPFEDNLLSKIGVRFDKPIHEGVDLGGLCEGTHGFFCNVNDLRLEMPGTEDLDKLLINTLFEVVSSESRISPFILFVKDVEKSIVGNSESYSAFKSKLEKLPDNVVIIGSHTQNDSRKEKSHPGGLLFTKFGSNQTALLDFAFPDSFGRLHDRGKEVPKTTKLLTKLFPNKVTVHMPQDEILLVDWKHQLDRDVETLKAKGNLIHLRTVLNRSGLECDGFETLCIKDQTLTNESAEKVIGWALCHHLMQNPEADAEDAKLVLSRESIQYGLGILLAIQSESKSLKKSLKDVVTDNEFEKRLLADVIPPTDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKISPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRSKILKVILAKEDISPDVDWDAIASMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERATALAEGRTPPALSGSEDVRPLNMDDFKYAHEQVCASVSSESVNMSELLQWNELYGEGGSRRKRALSYFM* 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00230 1256 CDD FHA 136 234 - -
Eupl11g00230 1256 MobiDBLite consensus disorder prediction 37 58 - -
Eupl11g00230 1256 MobiDBLite consensus disorder prediction 252 272 - -
Eupl11g00230 1256 Pfam AAA+ lid domain 1145 1180 IPR041569 -
Eupl11g00230 1256 Pfam ATPase family associated with various cellular activities (AAA) 992 1121 IPR003959 GO:0005524|GO:0016887
Eupl11g00230 1256 MobiDBLite consensus disorder prediction 22 36 - -
Eupl11g00230 1256 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 950 1126 - -
Eupl11g00230 1256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 951 1230 IPR027417 -
Eupl11g00230 1256 SUPERFAMILY SMAD/FHA domain 132 228 IPR008984 GO:0005515
Eupl11g00230 1256 MobiDBLite consensus disorder prediction 1 21 - -
Eupl11g00230 1256 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 424 1255 - -
Eupl11g00230 1256 SMART AAA_5 988 1125 IPR003593 GO:0016887
Eupl11g00230 1256 ProSitePatterns AAA-protein family signature. 1095 1114 IPR003960 GO:0005524|GO:0016887
Eupl11g00230 1256 Gene3D - 950 1230 IPR027417 -
Eupl11g00230 1256 MobiDBLite consensus disorder prediction 295 343 - -
Eupl11g00230 1256 Gene3D - 1124 1218 - -
Eupl11g00230 1256 MobiDBLite consensus disorder prediction 553 594 - -
Eupl11g00230 1256 Gene3D - 133 243 - -
Eupl11g00230 1256 CDD RecA-like_ATAD1 955 1121 - -
Eupl11g00230 1256 Pfam FHA domain 155 223 IPR000253 GO:0005515
Eupl11g00230 1256 MobiDBLite consensus disorder prediction 1 89 - -
Eupl11g00230 1256 MobiDBLite consensus disorder prediction 1186 1205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00230 Eupl-Chr11 2919372 2957514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00230 951 1183 Calmodulin-binding Proteins AT3G56690 40.928 1.49e-40 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00230 - - ming:122079629 2029.99