Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00202 ATGGCATCTGTTTGTGCATCTTCTGCCATTGCAGCTGTTGCCATCTCCCCTTCCAGTTCCCAGAAGAGTGGAACTGGGTTGGGGGCGACTAAGGCTTCGTTCCTTGTTGGGAAAAAACTGAGACAGAAGAAGTTTACAGCACCTGCAGCTGCACAACCGCGGTTCCCCGTGTGCGCAGCAGCTGACCCTGATCGTCCCCTCTGGTTTCCAGGCAGCACCCCTCCTCCATGGCTTGATGGCAGCCTTCCAGGAGACTTTGGATTCGACCCTCTTGGTCTTGGATCTGATCCAGAGAGCCTAAGATGGAACCAGCAAGCAGAGCTTGTGCACTGCAGATGGGCAATGCTAGGTGCTGCTGGTATTTTCATCCCTGAGTTCCTAACAAAGATAGGAATCCTAAACACCCCGTCATGGTACACTGCCGGGGAACTGGAGTACTTCACAGACAAAACCACCCTCTTTTTAGTTGAGCTCATCTTCATCGGCTGGGCTGAGGGTAGACGGTGGGCTGATATACTCAAACCTGGATGTGTGAACACCGACCCCATCTTTCCTAACAACAAGCTCACTGGGACCGACGTCGGATACCCTGGCGGCCTCTGGTTTGACCCACTCGGCTGGGGAACTGGTTCTCCAGAGAAGCTCAAGGAGTTGAGGACAAAGGAGATCAAGAACGGGAGGTTGGCCATGTTAGCAGTGATGGGTGCATGGTTCCAAGCCATCTACACTGGCACAGGCCCCATTGATAACCTCTTTGCCCACCTTGCTGACCCTGGTCATGCCACCATTTTTGCAGTAAGTGCAGCCCCAAACTTCATTTCTACAGCCCACATGTTTTCCCACTTCCACACGCACCCACTTCAGATTTGTATGTTCACATATGCACATATATATCCTCCATGTATGAGTCTGATATAA 918 0.5196 MASVCASSAIAAVAISPSSSQKSGTGLGATKASFLVGKKLRQKKFTAPAAAQPRFPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDKTTLFLVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPIDNLFAHLADPGHATIFAVSAAPNFISTAHMFSHFHTHPLQICMFTYAHIYPPCMSLI* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00202 305 FunFam Chlorophyll a-b binding protein, chloroplastic 75 260 - -
Eupl11g00202 305 SUPERFAMILY Chlorophyll a-b binding protein 61 266 - -
Eupl11g00202 305 Gene3D Chlorophyll a/b binding protein domain 75 260 - -
Eupl11g00202 305 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 25 273 IPR001344 GO:0009765|GO:0016020
Eupl11g00202 305 Pfam Chlorophyll A-B binding protein 74 240 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00202 Eupl-Chr11 2570370 2575014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00202 46 265 Chloroplast and Mitochondria Gene Families AT3G61470 88.688 1.35e-144 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00202 K08908 - mof:131144754 496.893