Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00185 ATGGAGAACAACAAACAGCAAGCTCAGTCCTCCTCATACCCACCACAACCTCCCTTTCAACATCTCCTACAACAGCAGCAACATCAACTCCAGATGTTCTGGACATTTCAACAGCAGGAGATCGAGCAAGTCAACGATTTCAAAAACCAGCATCTCCCCCTTGCCCGCATCAAGAAGATAATGAAGGCAGATGAGGACGTCCGCATGATCTCAGCTGAAGCCCCCATTTTGTTCGCCAAGGCTTGCGAACTTTTCATACTCGAGCTCACCATTCGATCATGGTTCCACGCCGAGGAGAATAAGCGTCGGACTCTTCAGAAGAACGACATCGGCGCAGCGGTCACTCGTGCTGATATCTTCGATTTCTTGGTTGATATTGTCCCGAAGGTTGAGATCAAAGATGAAGCTGGGTTGGGGCTTGTGGAGATCCACGGGATGGATCAGGGGGTGCATATTCATACACCATCGCAGGCTTGGCAGTCGGTGTGGCAAACGACGGACGACGGATTGTATGGAAGCGGCAACAGCGGACGGGCTAATTTGGATGGGCATGGGTATGTCGGTTATCCTTTGATTCCTAGTAGAAAAAGAATTTAG 597 0.4992 MENNKQQAQSSSYPPQPPFQHLLQQQQHQLQMFWTFQQQEIEQVNDFKNQHLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWFHAEENKRRTLQKNDIGAAVTRADIFDFLVDIVPKVEIKDEAGLGLVEIHGMDQGVHIHTPSQAWQSVWQTTDDGLYGSGNSGRANLDGHGYVGYPLIPSRKRI* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00185 198 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 11 142 - -
Eupl11g00185 198 FunFam Nuclear transcription factor Y subunit gamma 20 129 - -
Eupl11g00185 198 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 51 114 IPR003958 -
Eupl11g00185 198 Gene3D Histone, subunit A 17 129 IPR009072 GO:0046982
Eupl11g00185 198 SUPERFAMILY Histone-fold 8 123 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00185 Eupl-Chr11 2473220 2474240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00185 19 185 CCAAT-HAP5 Transcription Factor Family AT3G48590 63.107 2.07e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Eupl11g00185 CBFD_NFYB_HMF 2.5e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00185 - - vvi:100259532 248.44