Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00183 ATGAATTATCTCCATGTATTCGGGTTTGAATTGAAGGTGGAGCATCTGCTTTTGATGCTATGCTGTTGGATTCTTTCTGAGATTCCAATGAATTGGTTCATTAATGGTGGAGTCATGGAGAAAAAGACTGCTTTACTTGGTGATAGAGGGAAGAGATGGCTCCAATGGTGGGAGATTATCTCTGGGAGGGGTTGGAAGATCCAGCACCATTACTACCCGTATATTGGGTCGAAGAAGGTTCGAAAGACATGGTGGAGGAAGCTTTTGGCTACATGGGTACTTGGTTGGATCTTGGTGTCTTTGTGGATCTTCTGGTATATGAATTCTCAAGCAACTGAGAAGAGGAAAGAGACCCTGGCGAGCATGTGTGACGAGCGGGCGAGGATGTTACAGGACCAGTTTAATGTGAGTATGAACCATGTTCAGGCCTTGTCCATCCTGATCTCAACCTTCCACCATGGCAAGAACCCATCTGCTATTGATCAGACCACTTTCTCGAGGTACACGGGGAGAACCGCCTTCGAGAGGCCGCTCACGAGTGGCGTGGCTTATGCTGTGAAGGTGCTCCACTCTGAAAGGGAACAATTTGAGAAGCAGCAAGGGTGGACCATCAAGAGGATGGATACACTGGAAAAAACCCCGGTTCAGGAGGACGAGTATGCCTCCGAAAACCTGGAGCCGTCCCCTGTTCAAGAAGAATATGCCCCAGTTATCTTTGCACAGGATACCATTGCGCACGTGATTTCTCTTGATACGCTGTCGGGAAAGGAAGATCGTGAGAATGTCTTACGTGCAAGAGCATCGGGAAAGGGGGTTCTTACTGCTCCTTTCAGACTTCTCAAATCAAAGCGTCTTGGGGTTATACTAACTTTTGCTGTTTACAAGTCGGAACTTCCTCCAAATGCATCCCCAAATGAACGGATCCAAGCGACGGATGGGTACCTAGGTGGAGTTTTCGATATAGAATCACTTGTGGAGAAGTTACTTCATCAGCTCGCGAGCAAACAAACCATACTTGTGAATGTGTACGACACAACTAACCTCTCACATCCAATTAGCATGTATGGTTCAAATGTAACAGCTGATGGGATGTACCACATCAGCACCCTTAACTTTGGGGACCCATTTCGGAAGCACGAGATGCATTGCAGATTCAAGCAGAAGCCACCGTGGCCATGGCTGGAGACAACAACATCAATCGGTGTCCTTGTGATTGCATTGCTTGTTGGGCATATATTCCATGCAACAGTGAATAGGATCGCGAAAGTCGAGGATGATTACCACAAGATGATGGAGCTAAAAAAGCGGGCTGAGGCAGCAGACGTTGCAAAATCCCAGTTCCTTGCTACCGTTTCCCATGAGATCAGAACCCCAATGAATGGTGTTCTAGGGATGTTGCAGATGCTCATGGACACGGAACTAGATGTAACGCAGCAAGATTATGTGAGAACTGCCCAAGCTAGTGGAAAAGCTCTTGTTTCGCTTATAAATGAGGTTTTGGATCAGGCCAAGATTGAATCTGGTAAGCTCGAGCTTGAGGCTGTTCAGTTTGATCTGCGGGCAATCTTGGATGATGTTTTGTCCCTTTTTTCTGGCAAGTCTCAAAAGAAAGGAATAGAGTTGGCAGTGTACATCTCTGATCGGGTTCCTGAAATATTAATTGGCGATCCTGGGAGATTTCGTCAAATCATCACAAATCTCATGGGGAATTCAATCAAATTCACAGATAAAGGACACATCTTTGTAACAGTCCATCTCGTTGAGGAGGTGATGAGCTCAGTAAAAGTTGAGCCAGAAGCATCATCAAAGAATACATTGAGTGGGTTTCCTGTGGCAGATAGGTGCCGCAGCTGGGAAGGCTTCAAGACCTTCAGTCAGGAGGGACCTACGTGTCCGCAGACTTTCACATCAACCTCCTCTGAGCTCATAGATTTAATCGTATCTGTTGAAGATACAGGTGTTGGGATTCCTTTAGAAGCCCAATCTCGTGTTTTCACCCCGTTTATGCAGGTGGGCCCATCCATTTCCCGTACCCATGGGGGCACGGGTATCGGACTGAGTATAAGCAAGTGTCTGGTTGGCCTCATGAAGGGAGAAATTGGGTTCGTCAGTGAACCCCAGACTGGATCCACGTTCACCTTCACTGCTGTCTTCACCAACGGACACTCCAATTCAAACGAGTACAAGAACCAGGAAATTAAAAAACAGCCAAAGTCTATATCCTCTGAATTTCAAGAGATGACGGCATTGGTTGTGGACCCCAGGCCTGTCCGGGTGAAGGTGACAGGATATCATCTCCAACGGCTAGGAATCCATGTCAAAGTGGCCTCTGATCTAAACCAAGGCCTTTCTAGCATTACCAGTGGGAGTGCAGTCATCAACATGGTCCTTGTTGAAAATGAGGCTTGGGATAAGGATACTGATCTCTCAGCTCTCTTTGTTGACAAGTTAAGGAAGGGTGACCATTCCGATCTTCCGAAACTGTTTCTTCTTGCTAATTCCATCAGCCCTACCAAAACCAATGCTGCCAAGTCTGGTGGGTATACCCCAACAGTCATCATGAAGCCCCTGAGAGCAAGTATGCTGGCTGCATCTCTACAACGAGCCATAGGTGTTGTGAATAAGGGGAATTGCTGCAACGGAGGGCTCCCCGCTCTGTCTCTCCAGAATCTTCTTTGCGGGAAACAGATTCTGGTTGTAGATGACAATACTGTGAACCTCAAAGTAGCTGCTGGTGCTTTGAAGAAGTATGGAGCCGAAGTGGACTGTGCAGATAGTGGGAAAAAGGCGATTGCAATGCTTAAGCCACCCCACCACTTTGACGCCTGCTTCATGGATATCCAGATGCCTGAAATGGATGGATTCGAAGCCACTAAAAGGATTCGGGATATGGAACATGACATCAACAACCGTATTCGACATGGAGAGATATCCATGGAAGCTTATGGAAATGTTTTGAGTTGGCACGTACCCATATTGGCCATGACCGCAGATGTGATCCAGGCAACACAAGAGGAGTGCTTGAGGTGTGGGATGGATGGTTATGTGTCGAAACCATTTGAAGGAGAACAACTATACCGGGAAGTTGCCCGCTTTGTTAAATCGACGCCGACAACGACCAATAGAGACCACTTAAAACAGGCTTGA 3147 0.4703 MNYLHVFGFELKVEHLLLMLCCWILSEIPMNWFINGGVMEKKTALLGDRGKRWLQWWEIISGRGWKIQHHYYPYIGSKKVRKTWWRKLLATWVLGWILVSLWIFWYMNSQATEKRKETLASMCDERARMLQDQFNVSMNHVQALSILISTFHHGKNPSAIDQTTFSRYTGRTAFERPLTSGVAYAVKVLHSEREQFEKQQGWTIKRMDTLEKTPVQEDEYASENLEPSPVQEEYAPVIFAQDTIAHVISLDTLSGKEDRENVLRARASGKGVLTAPFRLLKSKRLGVILTFAVYKSELPPNASPNERIQATDGYLGGVFDIESLVEKLLHQLASKQTILVNVYDTTNLSHPISMYGSNVTADGMYHISTLNFGDPFRKHEMHCRFKQKPPWPWLETTTSIGVLVIALLVGHIFHATVNRIAKVEDDYHKMMELKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTELDVTQQDYVRTAQASGKALVSLINEVLDQAKIESGKLELEAVQFDLRAILDDVLSLFSGKSQKKGIELAVYISDRVPEILIGDPGRFRQIITNLMGNSIKFTDKGHIFVTVHLVEEVMSSVKVEPEASSKNTLSGFPVADRCRSWEGFKTFSQEGPTCPQTFTSTSSELIDLIVSVEDTGVGIPLEAQSRVFTPFMQVGPSISRTHGGTGIGLSISKCLVGLMKGEIGFVSEPQTGSTFTFTAVFTNGHSNSNEYKNQEIKKQPKSISSEFQEMTALVVDPRPVRVKVTGYHLQRLGIHVKVASDLNQGLSSITSGSAVINMVLVENEAWDKDTDLSALFVDKLRKGDHSDLPKLFLLANSISPTKTNAAKSGGYTPTVIMKPLRASMLAASLQRAIGVVNKGNCCNGGLPALSLQNLLCGKQILVVDDNTVNLKVAAGALKKYGAEVDCADSGKKAIAMLKPPHHFDACFMDIQMPEMDGFEATKRIRDMEHDINNRIRHGEISMEAYGNVLSWHVPILAMTADVIQATQEECLRCGMDGYVSKPFEGEQLYREVARFVKSTPTTTNRDHLKQA* 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00183 1048 ProSiteProfiles Histidine kinase domain profile. 450 720 IPR005467 -
Eupl11g00183 1048 Pfam Response regulator receiver domain 897 1028 IPR001789 GO:0000160
Eupl11g00183 1048 SMART CHASE_2 156 357 IPR006189 -
Eupl11g00183 1048 FunFam Histidine kinase 4 415 506 - -
Eupl11g00183 1048 Gene3D - 507 721 IPR036890 -
Eupl11g00183 1048 CDD HATPase_EvgS-ArcB-TorS-like 560 718 - -
Eupl11g00183 1048 Gene3D - 411 506 - -
Eupl11g00183 1048 Gene3D - 107 159 - -
Eupl11g00183 1048 SUPERFAMILY CheY-like 894 1033 IPR011006 -
Eupl11g00183 1048 PRINTS Bacterial sensor protein C-terminal signature 704 717 IPR004358 GO:0016310|GO:0016772
Eupl11g00183 1048 PRINTS Bacterial sensor protein C-terminal signature 680 698 IPR004358 GO:0016310|GO:0016772
Eupl11g00183 1048 PRINTS Bacterial sensor protein C-terminal signature 645 659 IPR004358 GO:0016310|GO:0016772
Eupl11g00183 1048 PRINTS Bacterial sensor protein C-terminal signature 663 673 IPR004358 GO:0016310|GO:0016772
Eupl11g00183 1048 Gene3D CHASE domain 160 389 IPR042240 -
Eupl11g00183 1048 CDD HisKA 443 504 IPR003661 GO:0000155|GO:0007165
Eupl11g00183 1048 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 555 718 IPR003594 -
Eupl11g00183 1048 SUPERFAMILY CheY-like 744 871 IPR011006 -
Eupl11g00183 1048 ProSiteProfiles CHASE domain profile. 156 382 IPR006189 -
Eupl11g00183 1048 FunFam Histidine kinase 4 160 389 - -
Eupl11g00183 1048 SMART HisKA_10 443 508 IPR003661 GO:0000155|GO:0007165
Eupl11g00183 1048 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 497 715 IPR036890 -
Eupl11g00183 1048 CDD REC_hyHK_CKI1_RcsC-like 897 1029 - -
Eupl11g00183 1048 FunFam Histidine kinase 3 890 1037 - -
Eupl11g00183 1048 Pfam His Kinase A (phospho-acceptor) domain 443 508 IPR003661 GO:0000155|GO:0007165
Eupl11g00183 1048 Pfam CHASE domain 159 355 IPR006189 -
Eupl11g00183 1048 ProSiteProfiles Response regulatory domain profile. 748 870 IPR001789 GO:0000160
Eupl11g00183 1048 Gene3D - 890 1037 - -
Eupl11g00183 1048 PANTHER TWO-COMPONENT HISTIDINE KINASE 119 1026 - -
Eupl11g00183 1048 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 430 509 IPR036097 GO:0000155|GO:0007165
Eupl11g00183 1048 SMART HKATPase_4 555 720 IPR003594 -
Eupl11g00183 1048 ProSiteProfiles Response regulatory domain profile. 896 1033 IPR001789 GO:0000160
Eupl11g00183 1048 SMART REC_2 895 1029 IPR001789 GO:0000160
Eupl11g00183 1048 Coils Coil 420 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00183 Eupl-Chr11 2434650 2441648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00183 1 1039 Miscellaneous Gene Families AT1G27320 68.887 0.0 1442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl11g00183 CHASE 6.8e-36 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00183 K14489 - nnu:104591747 1736.85