Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00177 ATGCAGTCCGGATTTGATATAAATGAGCTATTTCAAGAAGCTCGACATCGTTGGCTGAAGCCTGCAGAAGTGTTCTTTATTTTACAGAATCATGAGAATCACCAGCTCACTGAGACAATCCCTCAAAAGCCACCTGGTGGATCTTTGTTCCTTTACAACAAAAGGGTCCTCCGCTATTTCCGTAAAGATGGTCATATTTGGCGCAAAAAGAAGGCCGGGAGAACTGTTGGGGAAGGACATGAACGACTCAAGGTTGGAAATGCTGAAGCTTTAAATTGTTATTATGCACATGGAGAGCAGAATCCCAATTTTCAGAGGCGAAGCTATTGGATGCTGGATCCGGCATACGATTACATCGTTCTCGTTCACTATAGAGAAATAAGTGAGGGAAGACACAGTACTGGATCAACCTCACACATGTCACCAGGCTGCTCGTCTACTTTAAGTCAGAGTCCCAAATTTTATACTGCCCAAAATCAAGGCTCCACTTCTGCAGTTAGTAAATTATGTGAACCATATCGGAGTTCATTTAGTTCAGGGTCTGTAGAAATCAGTTCTGAGTTATTTATTGCAAATAATGGGATGAATCACTTGGATGGGACAGATAGATCAAGAGAGTTTAGTAGTTCGCCAGAGGCTGAGGTTGAAGCACTGCGAAGGATTGAGGAGCAGTTAAGTTTGAAAGATGAAGAAATAGCTGAGTTTTCTTTACACTGCAGACAGAATGAGAAGTCAAAAGATTCAGCAGTTCTAGATCACGAAAGAACCAATCTGGATGAACTTGTAGCTCTACAATATGGATCAGCATACAGAGAAAATAATCAATCTTTTAGTGGAAATGTTGGCATTCTAGATGATTCAAACAGCAGCCTGTTTCTACAAAGTTCAGGTGAAAATAAAAGTGAAAGGAAAGAATCACCATTTTGGAAAGAGATGCAGGAGCAGTATTCAGGTTCAACTTGGACTGTTTCCCGAGACAAAAATTTGGATACTGTGGACGGAAGTGAGAAGCTACTATCTTCTTCAGAAAGGGGGGAAATCTCTGCAAACCTAGTTGATCAGCAGGAAAACTTGATGTCTCAGTGGCTAGATCTTAGTGGCAATAACGCAGAAAATAGGAGTAACTGTCTCCCCACATTTGAGAATAATTTGAGTCTGCAGCTTTCAGCGGATAGTCCGTTTCTATTATCACCAGCTTCAACGTCACTGCTTCTGGAAAATGAAAACTACAAAGTTTCTGCAGACTCTTTTGGAGCAAGTACTCATGAAGCCAACCCTGATTACTACGCAATGTGGTTTGACCAAGAAAATCAGCTTGGAGCTTCTCTTGGTGCAGATTCAAGTTTGACTCCCGCACAGAAACAGGCGTTTAGTATTCAAGAAATATCCCCAGATTGGGGGTATGCCAATGAGGATACAAAGGTCATCATCGCTGGATCTTTTCTTTGTGATCCCTCAGAGTGTACATGGACATGCATGTTTGGGGACATTGAAGTTCCTGCACAAATCATTCAGGGAGGTGTCCTTCGTTGCCAGGCTCCTCCACACATTCCTGGAAAGGTCAGTCTGTGCATTTCATCTGGCAATCGGGAACCCTGCAGCGAAGTGCGAGACTTTGAATATCGTATTATACCAAGGAGATGTGATCACTGTAGTTTACCCCAAAGTGATGCTACTAGGAGCACAGATGAACTGCTGTTGCTTGTCAGATTTTCACAGTTGCTGAAGTATGACCCTCTTGTTCAGAAAGAAGATAGTGTTGAATCAGGAAGCAGTAGATTGAGAGAGTTAAAAATAGATGAAGATCCAGGGGGACACATTATGGAGGCACTCTTAGTTGCCAGTGAGACTCCATCTAGTACCATGGATTGGTTTCTGCAAGAACTTCTAAAAGAGAAGTTGCAGCTGTGGCTTTCATCCAAATACCAGGAAGGAGACACACCAGGTTATTCCCTGCTGAAGAAAGAGCAAGGCATAATACACTTGGTGGCTGCGTTGGGCTTTGAGTGGGCCCTAAACCCAATTGTTAATGCTGGGGTCAGTATAAACTTTCGTGACTTTCATGGATGGACTGCCCTTCATTGGGCTGCACGTTTTGGAAGGGAGAAAATGGTTGCTGCACTTATAGCTGCCGGTGCATCAGCAGGGGCAGTAACAGATCCCACTCCCCAAGATCCAACCGGTAAAACCCCAGGTTCGATTGCTGCTGACTACGGCCATAAGGGACTTGCAGGATATCTTTCAGAGGTGGCACTAACTAGCCATCTTTTATCACTCACACTGGAAGAGAGTGAGATTTCTAAAGGGTCTGCTGTCATGGAGGCAGAGAAAACTGTTGATAGCATCTCAAAGGGGAGCCTTGATTCCACGGAGGATCATGTCTCACTTGAACATTCCCTGGCTGCAGTCCGAAATGCAGCTCAGGCTGCTGCACGTATACAATCTGCTTTCCGCGAACGTTCTTTTAGGATAAGGCAACAGAGAGAGGCTGCTGCCACCGCTGCTGCTGCTATTTATGATGAGTATGGTATTACTCTAGATGACATTCATGGGCTTCTTGCCACATCAAAGTTGGCCTTCCGCCTTCGTGATTACAAGTTACATAAAGCAGCTCTGTTAATTCAGAAGAAATACCGTGGTTGGAAAGGACGCAAGGAATTTGTAGCCTTGCGCCAGAAAGTAGTGATGATACAGGCTCACGTCCGAGGCTATCAGGTCAGGAAGAAGTATAAGGTAATTCTATGGGCTGTTGGTGTTCTAGACAAGGTTGTATTGCGGTGGTGCCGTAGAGGAGCTGGTTTGCGAGGATTCCAGCCCGAGCCCGGATCTATCAATGAAAGTGAATATGAGGACCTCCTCAAGGTGTTCCGGAAACAGAAAGTGGATGTGGCTATTGAGGAAGCTCTCTCACGTGTGCTATCCATGGTTGAGTCTCCTGAGGCACGTAAGCAATACCGCCGCATGCTTGAAAGCTACTGGCTAGCTAAGGTTGAGTCAAGTGGCAATGCAAGTGAAACAGTATCGATGTCTCAAGGCGATGGCAGTAATATGGAAAGTGAGAATAATGAGTTGATTCAGTTTCCAATAGGAGCACTACTTGGATCGCCGTGA 3111 0.4462 MQSGFDINELFQEARHRWLKPAEVFFILQNHENHQLTETIPQKPPGGSLFLYNKRVLRYFRKDGHIWRKKKAGRTVGEGHERLKVGNAEALNCYYAHGEQNPNFQRRSYWMLDPAYDYIVLVHYREISEGRHSTGSTSHMSPGCSSTLSQSPKFYTAQNQGSTSAVSKLCEPYRSSFSSGSVEISSELFIANNGMNHLDGTDRSREFSSSPEAEVEALRRIEEQLSLKDEEIAEFSLHCRQNEKSKDSAVLDHERTNLDELVALQYGSAYRENNQSFSGNVGILDDSNSSLFLQSSGENKSERKESPFWKEMQEQYSGSTWTVSRDKNLDTVDGSEKLLSSSERGEISANLVDQQENLMSQWLDLSGNNAENRSNCLPTFENNLSLQLSADSPFLLSPASTSLLLENENYKVSADSFGASTHEANPDYYAMWFDQENQLGASLGADSSLTPAQKQAFSIQEISPDWGYANEDTKVIIAGSFLCDPSECTWTCMFGDIEVPAQIIQGGVLRCQAPPHIPGKVSLCISSGNREPCSEVRDFEYRIIPRRCDHCSLPQSDATRSTDELLLLVRFSQLLKYDPLVQKEDSVESGSSRLRELKIDEDPGGHIMEALLVASETPSSTMDWFLQELLKEKLQLWLSSKYQEGDTPGYSLLKKEQGIIHLVAALGFEWALNPIVNAGVSINFRDFHGWTALHWAARFGREKMVAALIAAGASAGAVTDPTPQDPTGKTPGSIAADYGHKGLAGYLSEVALTSHLLSLTLEESEISKGSAVMEAEKTVDSISKGSLDSTEDHVSLEHSLAAVRNAAQAAARIQSAFRERSFRIRQQREAAATAAAAIYDEYGITLDDIHGLLATSKLAFRLRDYKLHKAALLIQKKYRGWKGRKEFVALRQKVVMIQAHVRGYQVRKKYKVILWAVGVLDKVVLRWCRRGAGLRGFQPEPGSINESEYEDLLKVFRKQKVDVAIEEALSRVLSMVESPEARKQYRRMLESYWLAKVESSGNASETVSMSQGDGSNMESENNELIQFPIGALLGSP* 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00177 1036 Pfam CG-1 domain 13 126 IPR005559 GO:0003677
Eupl11g00177 1036 ProSiteProfiles Ankyrin repeat profile. 688 720 IPR002110 GO:0005515
Eupl11g00177 1036 CDD IPT 458 542 - -
Eupl11g00177 1036 Pfam IPT/TIG domain 459 541 IPR002909 -
Eupl11g00177 1036 ProSiteProfiles IQ motif profile. 890 914 IPR000048 GO:0005515
Eupl11g00177 1036 ProSiteProfiles CG-1 DNA-binding domain profile. 7 133 IPR005559 GO:0003677
Eupl11g00177 1036 SUPERFAMILY Ankyrin repeat 659 749 IPR036770 -
Eupl11g00177 1036 Gene3D - 865 914 - -
Eupl11g00177 1036 FunFam Calmodulin-binding transcription activator 2 866 914 - -
Eupl11g00177 1036 SUPERFAMILY E set domains 459 542 IPR014756 -
Eupl11g00177 1036 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 858 918 IPR027417 -
Eupl11g00177 1036 SMART CG_1_2 10 128 IPR005559 GO:0003677
Eupl11g00177 1036 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 5 995 - -
Eupl11g00177 1036 Pfam Ankyrin repeats (3 copies) 663 748 IPR002110 GO:0005515
Eupl11g00177 1036 ProSiteProfiles Ankyrin repeat region circular profile. 688 714 - -
Eupl11g00177 1036 SMART ANK_2a 727 756 IPR002110 GO:0005515
Eupl11g00177 1036 SMART ANK_2a 688 717 IPR002110 GO:0005515
Eupl11g00177 1036 Gene3D Immunoglobulins 452 546 IPR013783 -
Eupl11g00177 1036 ProSiteProfiles IQ motif profile. 867 894 IPR000048 GO:0005515
Eupl11g00177 1036 SMART iq_5 889 911 IPR000048 GO:0005515
Eupl11g00177 1036 SMART iq_5 866 888 IPR000048 GO:0005515
Eupl11g00177 1036 Gene3D - 596 753 IPR036770 -
Eupl11g00177 1036 Pfam IQ calmodulin-binding motif 892 911 IPR000048 GO:0005515
Eupl11g00177 1036 Pfam IQ calmodulin-binding motif 868 887 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00177 Eupl-Chr11 2373644 2402426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00177 5 1014 CAMTA Transcription Factor Family AT1G67310 48.520 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Eupl11g00177 CG-1 1.3e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00177 K21596 - nnu:104592861 1222.22