Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00163 ATGGTGGCCTGTTCTCTGTTCTTCTCCCCATCTCCATTAGGTTCGAGTACGTTGATACCTTCAATCACGCCCTTAGCTAAATTATCAACCAGGTTGAATCTTAGAAAATCCCAAGCCTTGAAGGTCTCCTGCGATTACTCTTGTTTCGAAGTTAAGGGCGTTAGTTATTCCCCCCCTGGGACCCAGCACAACCTTTTGAATGAAGTTAGTTTTTCCCTTCACGAGAAAAGCTTTGGCTTGATCTTCGGACGGAGTGGAAGTGGAAAAACTACTCTACTGCAGCTTCTTGCTGGGTTATCCAAACCAACATCAGGATCTATTTATATTCAAAGATATGGAAATGATGGGAACCCAAATCAATCTCCTGAAATACTGCCTCCAGAAAGAGTTGGCATTGTTTTTCAGTTTCCTGAGAGGTATTTCTTGGCTGATACTGTGCTTGAGGAAGTTACATTTGGGTGGCCAAGGCAGAGGGGAGGCCTTCTATTGAAAGAGCATCTTGCTTTGAGACTCCAAACAGCTATCAATTCTGTCGGATTGAATGGGATCTCCTTGGATGAAGATCCTCACGCTCTAAGTGGTGGCTACAAGCGTCGACTTGCCTTGGCGATTCAGCTAGTACAAGTCCCGGATTTGTTGATATTAGATGAGCCTCTTGCCGGTCTTGATTGGAAGGCTCGTGCAGATGTTGTAAAGTTGTTAAAGCATCTAAAGAAGGAACTAACTTTACTTGTTGTCAGCCATGACCTCAGGGAATTATCATCTCTAGTGGATCGATCATGGAGGATGGAAATGGGTGGAATTCTGAAGGAAGAGCCTCTACCAGTTTAA 831 0.4428 MVACSLFFSPSPLGSSTLIPSITPLAKLSTRLNLRKSQALKVSCDYSCFEVKGVSYSPPGTQHNLLNEVSFSLHEKSFGLIFGRSGSGKTTLLQLLAGLSKPTSGSIYIQRYGNDGNPNQSPEILPPERVGIVFQFPERYFLADTVLEEVTFGWPRQRGGLLLKEHLALRLQTAINSVGLNGISLDEDPHALSGGYKRRLALAIQLVQVPDLLILDEPLAGLDWKARADVVKLLKHLKKELTLLVVSHDLRELSSLVDRSWRMEMGGILKEEPLPV* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00163 276 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 49 276 IPR003439 GO:0005524
Eupl11g00163 276 Pfam ABC transporter 66 219 IPR003439 GO:0005524
Eupl11g00163 276 FunFam ABC transporter I family member 11 chloroplastic 38 274 - -
Eupl11g00163 276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 270 IPR027417 -
Eupl11g00163 276 PANTHER HEAVY METAL TRANSPORTER 50 272 - -
Eupl11g00163 276 SMART AAA_5 75 267 IPR003593 GO:0016887
Eupl11g00163 276 CDD ABC_cobalt_CbiO_domain1 50 266 IPR015856 GO:0005524|GO:0016020|GO:0055085
Eupl11g00163 276 Gene3D - 33 274 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00163 Eupl-Chr11 2215455 2226176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00163 50 250 Calmodulin-binding Proteins AT2G36910 26.066 1.80e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00163 - - nnu:104592841 424.861