Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00148 ATGGCTGATTTTGGCATGCAGGCCCCCAAGAGAGGTGTAAAAGCGCCCGCAGTACCAGCAAAGAAGAAACCGGAGAAGGTTGCGAACCCTTTATTCGAGAAGCGTCCGAAACAGTTTGGCATCGGAGGGGCATTGCCACCAAAGAGAGATCTGCACCGGTTTGTGAAGTGGCCTAAGGTTGTCCGCATTCAAAGGCAGAGGAGGATTCTCAAGCAACGCCTGAAGGTCCCCCCGGCCTTGAATCAGTTCACAAAGACGCTGGACAAGAACCTCGCAACGAACCTATTCAAGATGCTTCTCAAGTACAGGCCCGAGGACAAAGCTGCGAAGAAGGAACGTCTTTTGAAAAGGGCTCAGGCTGAGGCCGAAGGAAAGACAGTTGAGGTTAAAAAACCTATTGTCGTGAAGTATGGACTAAACCATGTTACCTATCTTATCGAGCAGAACAAGGCGCAGTTGGTAGTTATCGCGCATGATGTGGACCCAATAGAGCTGGTTGTCTGGCTTCCTGCCTTGTGCAGGAAGATGGAGATCCCATACTGCATTGTGAAGGGCAAAGCACGCTTGGGAGCGATTGTACACAAGAAAACTGCTGCTGTTTTGTGTTTGACCACAGTCAAGAATGAGGATAAGTTGGAGTTCAGCAAAATCTTAGAAGCGATCAAGGCCAACTTCAATGACAAGTACGATGAGTACCGGAAGAAGTGGGGAGGTGGGATCATGGGCTCCAAATCCCAGGCCAAAACCAAGGCCAAGGAGAAGCTTCTTGCCAAGGAAGCTGCGCAGAGGATGACCTAG 798 0.5013 MADFGMQAPKRGVKAPAVPAKKKPEKVANPLFEKRPKQFGIGGALPPKRDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVEVKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHKKTAAVLCLTTVKNEDKLEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEAAQRMT* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00148 265 ProSitePatterns Ribosomal protein L7Ae signature. 173 190 IPR004037 GO:0042254|GO:1990904
Eupl11g00148 265 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 122 212 IPR004038 -
Eupl11g00148 265 PRINTS Ribosomal protein L7A family signature 53 70 IPR001921 -
Eupl11g00148 265 PRINTS Ribosomal protein L7A family signature 73 92 IPR001921 -
Eupl11g00148 265 PRINTS Ribosomal protein L7A family signature 192 216 IPR001921 -
Eupl11g00148 265 PRINTS Ribosomal protein L7A family signature 36 53 IPR001921 -
Eupl11g00148 265 PRINTS Ribosomal protein L7A family signature 224 244 IPR001921 -
Eupl11g00148 265 PRINTS Ribosomal protein L7A family signature 97 110 IPR001921 -
Eupl11g00148 265 PRINTS Ribosomal protein L7A family signature 131 151 IPR001921 -
Eupl11g00148 265 FunFam 60S ribosomal protein L7a 57 240 - -
Eupl11g00148 265 SUPERFAMILY L30e-like 92 226 IPR029064 -
Eupl11g00148 265 Coils Coil 108 128 - -
Eupl11g00148 265 Gene3D - 57 240 IPR029064 -
Eupl11g00148 265 PRINTS Ribosomal protein L7A/RS6 family signature 170 180 IPR018492 -
Eupl11g00148 265 PRINTS Ribosomal protein L7A/RS6 family signature 154 167 IPR018492 -
Eupl11g00148 265 PRINTS Ribosomal protein L7A/RS6 family signature 135 149 IPR018492 -
Eupl11g00148 265 PRINTS Ribosomal protein L7A/RS6 family signature 180 194 IPR018492 -
Eupl11g00148 265 MobiDBLite consensus disorder prediction 1 25 - -
Eupl11g00148 265 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 49 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00148 Eupl-Chr11 2027819 2033712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00148 8 265 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 87.209 2.27e-168 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00148 K02936 - ming:122075346 454.907