Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00133 ATGGGTTGTTTCCAATCGAGAGGGGTGACGGAGGAGTTGAATTCGAGCAATGCGAGAGTTGATAGACAGGAAGACCAGCCGGTGAACTCCAATGTTGCTCAATTGTCTTCCGGAGGGGACATACCCAGATCAAGAAACACTACAGAGGGATCAGGAAGTGGATCGTCTTTGAACCGGCCTGATGCTCGTATTGCCTCTCGGACATTCACCTTCCAAGAGCTTGCAACTGCGACAAGCAACTTTAGGCCAGGATCCATTGTAGGGGAAGGTGGATTTGGACCTGTTTATAAAGGGCGCCTAGGGAAAACGGGTCAAATTGTGGCTGTAAAACAGCTGGATAGAAATGGGTGCCAAGGGAGCAGAGAATTTTTGGTGGAGGTTCTCATGCTCAGTCTTCTGCATCACCCTAACCTTGTCAATCTGGTTGGTTACTGTGCGGATGGTGACCAACGTCTTCTTGTCTATGAGTTCATGCCCTTGGGATCGTTGGAAGATCATCTCCACGATCTGCCACCTGATAAGGCAGCACTAGACTGGAACACAAGGATGAAAATAGCAGTTGGCGCAGCCAAAGGGTTGGAATACCTGCACGATATGGCGAATCCCCCAGTTATCTACAGAGACTTAAAATCATCCAACATATTATTGGATGAAGGGTACCACCCGAAGCTGTCCGATTTTGGACTGGCAAAGCTTGGTCCAGTTGGAGGTCAATCACATGTATCAACCAGGGTGATGGGAACTTATGGTTATTGTGCTCCTGAGTATGCCATGACTGGTCAACTGACGATGAAGTCTGACATCTACAGTTTTGGGGTAGTCTTCTTGGAGCTGATTACAGGACGTAAGGCCATTGATAACACCCTAGCCCGTGAAGAACAGAACCTTGTGGCATGGGCACGTTCCATGATCAGGGGCCGCCAGGGATTTTCTACGATGGCAGACCCACGGCTACGAAGTCTGTACCCAATGCGTGGACTCTACCAGGCTCTCGCTGTGGCAGCCATGTGTGTTCAGGAACAGGCTGCCACCCGCCCTCTCATTGCAGAAGTGGTGACCGCCCTGTCCTTCTTGGCTTCTCTGGCATACGAGCCTGATGCGGCTCCCGACCCTGGCTATAGAATTGGTGGAGTTAAGAATGAGAGAAGGAACAGAGGTGGCGGGACAGACGCGAGAGGTAGAAAGATTGGGAAGATTGAAAGAGGGGAAGGATCTGGATGCAAGTGGGATTTGGAGGAGGCCAAGAAGGACGACTCTCCCGGACAGAGGAAACTGAACAGGGATTTGGATCGAGAGCGAGTAGTTGCTGAGGCCAAAGTGTGGGGAGAGAATTGGCGGGAAAAGAGGCCAGAAAACACCCAAGGCAGTGTTGATGGTGCAAACAAGTAA 1389 0.5076 MGCFQSRGVTEELNSSNARVDRQEDQPVNSNVAQLSSGGDIPRSRNTTEGSGSGSSLNRPDARIASRTFTFQELATATSNFRPGSIVGEGGFGPVYKGRLGKTGQIVAVKQLDRNGCQGSREFLVEVLMLSLLHHPNLVNLVGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKAALDWNTRMKIAVGAAKGLEYLHDMANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGGQSHVSTRVMGTYGYCAPEYAMTGQLTMKSDIYSFGVVFLELITGRKAIDNTLAREEQNLVAWARSMIRGRQGFSTMADPRLRSLYPMRGLYQALAVAAMCVQEQAATRPLIAEVVTALSFLASLAYEPDAAPDPGYRIGGVKNERRNRGGGTDARGRKIGKIERGEGSGCKWDLEEAKKDDSPGQRKLNRDLDRERVVAEAKVWGENWREKRPENTQGSVDGANK* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00133 462 SMART serkin_6 81 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00133 462 MobiDBLite consensus disorder prediction 373 462 - -
Eupl11g00133 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Eupl11g00133 462 FunFam probable serine/threonine-protein kinase RLCKVII 54 157 - -
Eupl11g00133 462 SUPERFAMILY Protein kinase-like (PK-like) 65 354 IPR011009 -
Eupl11g00133 462 MobiDBLite consensus disorder prediction 8 60 - -
Eupl11g00133 462 MobiDBLite consensus disorder prediction 376 453 - -
Eupl11g00133 462 ProSiteProfiles Protein kinase domain profile. 81 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00133 462 Gene3D Phosphorylase Kinase; domain 1 62 157 - -
Eupl11g00133 462 PANTHER OS07G0668900 PROTEIN 40 364 - -
Eupl11g00133 462 FunFam Serine/threonine-protein kinase PBS1 158 371 - -
Eupl11g00133 462 Gene3D Transferase(Phosphotransferase) domain 1 158 365 - -
Eupl11g00133 462 Pfam Protein kinase domain 84 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00133 462 MobiDBLite consensus disorder prediction 1 60 - -
Eupl11g00133 462 CDD STKc_IRAK 87 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00133 Eupl-Chr11 1844503 1851250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00133 64 360 Glycoside Hydrolase AT3G07070 69.360 1.71e-153 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Eupl11g00133 Pkinase 9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00133 K13430 - nnu:104592805 647.121