Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00127 ATGGAGATGCTCAATTTTGTTAAAAATGGAGTTATTAGATTGCCTCCTGGTTTCCGATTCCATCCCACCGATGAAGAACTTGTCGTTCAGTACTTAAAGCGCAAGGTGTTTGCTTGCCCATTACCAGCTTCAATCATCCCTGAATTTGATGTTTGCAAGTCCGACCCTTGGGATTTGCCAGGTGATTCGGAACAAGAGCGGTACTTTTTCAGCACTAGGGAAGCCAAGTACCCGAATGGAAATAGAACAAATAGAGGGACTGGTTCAGGATACTGGAAGGCTACTGGTATAGATAAGAAAATTGTTGGTTCTAGAAACAACCAAGTAGTAGGGATGAAGAAAACTCTGGTTTTCTACAGAGGGAAGCCTCCAAAGGGGTCTAGAACTGACTGGATCATGCATGAATATCGCCTTGTTGGTTCTGGAACTACAACCGGCATTTCTCCACCACAGAGAAAAAACTCTAGCCAAGTGAGTAGCTATGAGAATGAAACAGTACCTACTGTTTATAAGTCAGTCAGGATATCTACTTCATTCAAATTGAAAGAAACCCATTTCTTAGTTTTTGAATCTGAACTTTTTAGTAAAAAACCCATTTGCAATTTTGGTCTTATTTTCATTGTTTTTTATTTTTTATTTTTTTTGCAGAATTCCATGGTGCAAATGGAAGATTGGGTTATCTGTCGAATATTTCTGAAGAAAAGATGTATTAAAAATGAGGACGAGATTGCACAACCATGCAACACAAATCGGAATCTCAGGGTAGCAAGGCCTAGTTTTATAGATTTCATGATGCAAGACAAGACTGATTCAAGTCCTTCCTCTTCTTCAGCATCAAGTGGGATAACCGAAGTTTCTTCTACTGGATCTGATCATGAAGAAAACAGTAGCTGCAATAGTGTTTCTTCATCTTCTTACAGAAGAGAGCTTTGA 933 0.3912 MEMLNFVKNGVIRLPPGFRFHPTDEELVVQYLKRKVFACPLPASIIPEFDVCKSDPWDLPGDSEQERYFFSTREAKYPNGNRTNRGTGSGYWKATGIDKKIVGSRNNQVVGMKKTLVFYRGKPPKGSRTDWIMHEYRLVGSGTTTGISPPQRKNSSQVSSYENETVPTVYKSVRISTSFKLKETHFLVFESELFSKKPICNFGLIFIVFYFLFFLQNSMVQMEDWVICRIFLKKRCIKNEDEIAQPCNTNRNLRVARPSFIDFMMQDKTDSSPSSSSASSGITEVSSTGSDHEENSSCNSVSSSSYRREL* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00127 310 ProSiteProfiles NAC domain profile. 14 233 IPR003441 GO:0003677|GO:0006355
Eupl11g00127 310 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 284 - -
Eupl11g00127 310 SUPERFAMILY NAC domain 10 144 IPR036093 GO:0003677|GO:0006355
Eupl11g00127 310 Pfam No apical meristem (NAM) protein 15 138 IPR003441 GO:0003677|GO:0006355
Eupl11g00127 310 Gene3D NAC domain 23 237 IPR036093 GO:0003677|GO:0006355
Eupl11g00127 310 MobiDBLite consensus disorder prediction 267 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00127 Eupl-Chr11 1785111 1787096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00127 1 138 NAC Transcription Factor Family AT5G13180 82.609 6.89e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl11g00127 NAM 2.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00127 - - ini:109193420 293.123