Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00122 ATGGGTTGCATTCTCGGTACGAGAGCAGCGGGAGACGGCCGGGAACAGGATGGAGTTTCAGGCGGTCACGGCTATGTCGAAGAGCTGTCAGATGCCGCTAACGGCGTTAGGGTTCGAAAGGAAGGAGTTGAGAAGGCGAGAGAGGTGATCCGTCGGAGCGGAGATTTATCGGCGGCGGAGCGTCGGAAACCGAAGCTGAATCAGTCACTGAGAACTCAGCACGGGTGGCCAGCATGGCTCTCTGCGGTCGCCGGAGACGCGATCGAGGATTGGACGCCTCGACGAGCCGACACCTTCGAGAAGCTTGATAAGATTGGTCAAGGGACTTACAGCAATGTGTATAAAGCTAGAGATCTCATTACTGGAAAGATTGTTGCTTTAAAGAAGGTTCGGTTTGATAATTTAGAGCCAGAGAGTGTGAAATTCATGGCGAGAGAGATTCTTGTTTTGAGGCGTCTCGATCATCCAAATGTGGTTAAGTTGGAAGGTCTGGTTACTTCGAGGATGTCTTGTAGTCTCTATCTGGTTTTTGAATATATGGAACACGATCTTGCGGGGCTTGCGTCGGGGATCAAATTTACCGAGTCACAGGTCAAATGCTATATGAAGCAACTACTGTCTGGGCTTGAGCATTGTCACAACAGAGGTGTATTGCATCGTGATATCAAGGGTTCAAATCTGCTTCTTGACAATGAAGGAATTCTTAAAATAGCTGATTTTGGACTGGCTTCTTTTTATGACCCTGACCACAGGCAACCCATGACCAGTCGAGTTGTCACCCTTTGGTACCGACCCCCAGAGCTTCTTCTGGGAGCCACTTATTATGGTGTTGGTGTTGACCTTTGGAGTGCTGGCTGCATTTTGGGGGAGTTGCTTGCTGGAAAGCCAATAATGCCAGGACGGACAGAGGTGGAACAGCTGCACAAGATTTTTAAGTTGTGTGGGTCCCCATCAGATGAATATTGGAAGAAGTCGAAGTTGCCGCATGCTACTATTTTCAAGCCACAGCAACCATACAAGCGTTGTATAGCAGAAACGTTTAAAGATTTCCCAGCTTCTTCGCTACCCCTGATCGCAACTCTTCTTTCAATTGACCCAGATGAACGAGGCACATCCACTTCTGCTCTAAAAAGTGAATTCTTCACCACGAAGCCTTGCGCTTGTGAGCCGTCAAGCTTACCAAAATATCCTCCAAGCAAAGAAATGGATGTGAAATTGAGGGATGCAGAAGCTAGAAGGCAAAGAGGCCTGAGTGGTAAAGGAAATGTTGGTGATGGTGCGAAGAGAGTCCGAGTCCATGATCGGGTAGGCCGGGCGGTTCCGGCCCCAGAAGCAAATGCCGAGCTGCAAGCAAACTTGGATCGCTGGAGACTAATTACGCAAGCAAATGCCAAGAGCAAGAGTGAGAAATTCCCGCCTCCCCATCGGGATGGAGCAGCTGGGTTTCCATTGGATGCATCACACAATGGGCCCACATCATTCATTCCACCTGACACTTCTTTCACCTCATCAATTTTTGAACCGAAGTCATCAGGCATATCACATTCATGCTCCTTGAGAAATCCTGCAGCTGCCGGGGGACCTTCTAGGAGGAGGAAAGCCAACAGAGAAGATCCTCAAATGGCTCCCTCTTGGACGTTTATTCACTCATTCAACCCATCCACACTGGGGCGCGCAATGGATCTGAGAATTAAGGGTAAAGAATCAGTTTCTGAGGTTTTCGGCGGCTGA 1731 0.4905 MGCILGTRAAGDGREQDGVSGGHGYVEELSDAANGVRVRKEGVEKAREVIRRSGDLSAAERRKPKLNQSLRTQHGWPAWLSAVAGDAIEDWTPRRADTFEKLDKIGQGTYSNVYKARDLITGKIVALKKVRFDNLEPESVKFMAREILVLRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLASGIKFTESQVKCYMKQLLSGLEHCHNRGVLHRDIKGSNLLLDNEGILKIADFGLASFYDPDHRQPMTSRVVTLWYRPPELLLGATYYGVGVDLWSAGCILGELLAGKPIMPGRTEVEQLHKIFKLCGSPSDEYWKKSKLPHATIFKPQQPYKRCIAETFKDFPASSLPLIATLLSIDPDERGTSTSALKSEFFTTKPCACEPSSLPKYPPSKEMDVKLRDAEARRQRGLSGKGNVGDGAKRVRVHDRVGRAVPAPEANAELQANLDRWRLITQANAKSKSEKFPPPHRDGAAGFPLDASHNGPTSFIPPDTSFTSSIFEPKSSGISHSCSLRNPAAAGGPSRRRKANREDPQMAPSWTFIHSFNPSTLGRAMDLRIKGKESVSEVFGG* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00122 576 PANTHER CELL DIVISION PROTEIN KINASE 97 385 - -
Eupl11g00122 576 Gene3D Transferase(Phosphotransferase) domain 1 185 419 - -
Eupl11g00122 576 SUPERFAMILY Protein kinase-like (PK-like) 93 385 IPR011009 -
Eupl11g00122 576 SMART serkin_6 99 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00122 576 FunFam probable serine/threonine-protein kinase At1g54610 86 181 - -
Eupl11g00122 576 ProSiteProfiles Protein kinase domain profile. 99 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00122 576 Gene3D Phosphorylase Kinase; domain 1 85 181 - -
Eupl11g00122 576 CDD STKc_CDK9_like 99 381 - -
Eupl11g00122 576 Pfam Protein kinase domain 99 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00122 576 FunFam probable serine/threonine-protein kinase At1g54610 182 421 - -
Eupl11g00122 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Eupl11g00122 576 MobiDBLite consensus disorder prediction 1 22 - -
Eupl11g00122 576 ProSitePatterns Protein kinases ATP-binding region signature. 105 128 IPR017441 GO:0005524
Eupl11g00122 576 MobiDBLite consensus disorder prediction 511 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00122 Eupl-Chr11 1697811 1705154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00122 91 413 Core Cell Cycle Gene Families AT5G10270 51.613 3.21e-115 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Eupl11g00122 Pkinase 3.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00122 K08819 - nnu:104592794 908.672