Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00120 ATGGAAGTTGATCGCAGATGGAAGTTGATCGCAGGTAGACTTCCTAACCGGACTGTGAATGATGTAAAGAACTATTGGAACTCCCACTTGAGCAAGAAGTACTTAGCGAAACTGAAGCCAAGACCTGAAAAGGTTGAAGTCATGAGGCCTAAGGTTTGGACTTTCATCTCCAGATCAATTCAAGCTTCAGGAAGCCAACAACAAGAACAACAACAGCAAGTGCCAAAGCTCAGATTAGAAGAACATACGAATACCATGTTGTCGAACAATCTAACTCTTAATGGTGAAGATATTGAGGCCATTGGAGAAGAAAGTGGAAAGGAGGATGGAGGATTAATCCCCATGCATTTTCTTTTCCGAACCACTAGTGCCGCCGAATTCAAGGTGAGAATGAAACCAGAGGGGATGAGGACACGTGGTGACATATGA 429 0.4359 MEVDRRWKLIAGRLPNRTVNDVKNYWNSHLSKKYLAKLKPRPEKVEVMRPKVWTFISRSIQASGSQQQEQQQQVPKLRLEEHTNTMLSNNLTLNGEDIEAIGEESGKEDGGLIPMHFLFRTTSAAEFKVRMKPEGMRTRGDI* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00120 142 ProSiteProfiles Myb-like domain profile. 1 30 IPR001005 -
Eupl11g00120 142 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 5 71 - -
Eupl11g00120 142 Gene3D - 1 33 - -
Eupl11g00120 142 CDD SANT 5 30 IPR001005 -
Eupl11g00120 142 Pfam Myb-like DNA-binding domain 5 30 IPR001005 -
Eupl11g00120 142 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 34 IPR017930 -
Eupl11g00120 142 SUPERFAMILY Homeodomain-like 4 35 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00120 Eupl-Chr11 1667463 1672948 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00120 6 50 MYB Transcription Factor Family AT1G66380 57.778 6.42e-14 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl11g00120 Myb_DNA-binding 1.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00120 K09422 - zju:112489267 67.0106