Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00118 ATGAAAATACCAGAAAACCACCATCTCCATCTCTCAAACCAGCTTATCTCCTCTCTGATGGAGGAAATCCCTCGCATACAGACCTTCAAAGGAAAATGGTCTGTAATCGGAAACAAACTCAACGATCTCCCAACCCAACTCAAAGATCTTTCCGATTTCCCTAATTTCTCATCTAATCCTCTCTCGTCTGACCTCTTACAGTCCATCTCCCAAACCCTAACCGATGCTCTCGCGCTTGCAAGAAAGTGTCGAAACCCTAATATATCTGCAGGGAAGCTCAGGACGCAGAGCGATATCGATTCGATTGCTGCGAAGCTCGATCAGCATTTAAAGGACAGTGATCTTTTGATCAGGAGCGGTGTTCTTCAAGAGAGATTTGTTGGTTCGGCGGCATCCACGAGTTCGAAGAGAGAAGTTGTCCGAGTCGAAGCGAGGAACATGATAACTCGGTTGCAGATAGGGAATCCCGAGTCGAAGAAAGCTGCAATGGACTCGTTGCTAGGGTTGCTTCAGGAGGACGACAAGAACGTGTTGATCGCTGTTGCGCAGGGTTTGGTGCCGGTTCTTGTTCGGTTGCTCGATTCGACCTGTGTGGAGATTAAAGAGAAAGCCGTTTCAGCGATTTCTAGGGTTTCTGTGGTGGATACCAGCAAGCATGTTTTGGTTGCTGAGGGGGTTTTGCTTCTAAATCATCTTCTTCGGGTTCTTGAATCGGGAAGTGGGTTTGCAAAGGAAAAGGCCTGTATTGCTCTTCAAGCTCTAAGTTTTTCGAAGGAGAATGCTAGGGCAATTGGGTCTAGGGGTGGAATTTCTTCTCTTCTGGAGATTTGCCAGAACGGAACTCCCGGTTCTCAGGCTATTGCAGCCGGAGTGCTGAGAAATCTCGCTGGATTTCCTGAAATCAGGCAAAATTTTATTGAGGAAAATGCGATTCCAGTTCTTATCGGACTTTCGGCCTCTGGGACTATGGCGGCTCAAGAAAATTCAATTGGGTGTCTGTGTAATTTAGTATCAGAGGATGAAAACTCGAAGCTTTTGGTTGTTAGGGAAGGCGGTGTCGATTGTCTGAAGAATTTCTGGGATGCTGCTCCAATGGCTCGGAGTCTCGAAGTCGCAGTCGGTTTGTTAAGGAACTTGGCTTCTTTCAGGCCTATTGCTGAAGTTCTTGTTTCTGACGGGTTTATACCACGGCTGGTCGGAGTTTTGTGTTGTGAGGTGTCGGGTATGAGAATTGCTGCTTCCAGAGCTGTTTATGAGCTTGGATTCAGCTCGAAAACAAGGAAATTGATTGGAGAATCTGGTTGCATTCCTCCTTTGGTTAGGATGTTGGACGTAAAAGCGGTTGAAGAGAAAGAAGCTGCTGCGACGACCTTGTCTTCTCTTTTGCAGTTTGCGGGAAACAGAAGAATTTTCCGCAAAGAAGAGAGAGGGATCGTTGGTACGGTTCAACTTCTTGATCCTTCGATCCAGAATTTGGAGAAGAAATACCCAATTTCTATTTTACTTTCAATTGCACAGTCTAAGAAGTGCAGGAAACAGATAATAGCCGCAGGTGCTTGTGCATACTTGAAAAAACTTGTTGAGATGGAGATCGAGGGTGCTAAGAAGCTTCTGGAAAGCCTAGGTCGGGGTAAGCTATGGGGCGTGTTTGCCAGAACATGA 1662 0.4633 MKIPENHHLHLSNQLISSLMEEIPRIQTFKGKWSVIGNKLNDLPTQLKDLSDFPNFSSNPLSSDLLQSISQTLTDALALARKCRNPNISAGKLRTQSDIDSIAAKLDQHLKDSDLLIRSGVLQERFVGSAASTSSKREVVRVEARNMITRLQIGNPESKKAAMDSLLGLLQEDDKNVLIAVAQGLVPVLVRLLDSTCVEIKEKAVSAISRVSVVDTSKHVLVAEGVLLLNHLLRVLESGSGFAKEKACIALQALSFSKENARAIGSRGGISSLLEICQNGTPGSQAIAAGVLRNLAGFPEIRQNFIEENAIPVLIGLSASGTMAAQENSIGCLCNLVSEDENSKLLVVREGGVDCLKNFWDAAPMARSLEVAVGLLRNLASFRPIAEVLVSDGFIPRLVGVLCCEVSGMRIAASRAVYELGFSSKTRKLIGESGCIPPLVRMLDVKAVEEKEAAATTLSSLLQFAGNRRIFRKEERGIVGTVQLLDPSIQNLEKKYPISILLSIAQSKKCRKQIIAAGACAYLKKLVEMEIEGAKKLLESLGRGKLWGVFART* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00118 553 SMART arm_5 298 338 IPR000225 GO:0005515
Eupl11g00118 553 SMART arm_5 257 297 IPR000225 GO:0005515
Eupl11g00118 553 SMART arm_5 340 381 IPR000225 GO:0005515
Eupl11g00118 553 SMART arm_5 423 463 IPR000225 GO:0005515
Eupl11g00118 553 SMART arm_5 173 213 IPR000225 GO:0005515
Eupl11g00118 553 SMART arm_5 382 422 IPR000225 GO:0005515
Eupl11g00118 553 Gene3D - 134 362 IPR011989 -
Eupl11g00118 553 SUPERFAMILY ARM repeat 149 466 IPR016024 -
Eupl11g00118 553 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 184 226 IPR000225 GO:0005515
Eupl11g00118 553 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 552 - -
Eupl11g00118 553 Gene3D - 363 536 IPR011989 -
Eupl11g00118 553 Pfam Armadillo/beta-catenin-like repeat 424 461 IPR000225 GO:0005515
Eupl11g00118 553 Pfam Armadillo/beta-catenin-like repeat 174 210 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00118 Eupl-Chr11 1634394 1636664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00118 186 471 U-box Gene Family AT2G23140 25.436 1.74e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00118 - - nnu:104592787 817.764