Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00113 ATGTCGAGAGCAACAGTGGAGCTCGATTTCTTCGGAATGGAGAAAGAAAACTCTTCCAAATCTCAGTTTCAAAGGCTACTTGAGCAAAGAAGAACCGTTCGAGGTATCCAAAGCGCCATTTCGAAGATCAATCCACAGCTTCTGAAGACTGTAATCAACTCCGGAGGTACGACAGGAAATTCGGATGGCGGTTTTCTGAAGCAGGAAACATTTTCCCGACCAAACGGAGCTCTGTTAACTTCGGACGATCCGTTTTCTGTTCCCTCAACGCCAGAAGGAAATCAAAATTTCCTTTCGTCTGTACGGTCTGTACCCGCCTTCAGCGGTGCTTCTGAGAGTCCTCCGGGAACACCAACTGCTCCTCTAACGATTTTCTACAACGGAACAATCTCCGTCTTCGATGTTTCTCACGATAAGGCGGAGATAATTATGAAATTTGCGGAGAAAGGAAACTCTAAATCTGCTGAATCGATGAACTCGAAACTTGGAATTTTTTCATCTTCAAGCGACGAACTGAATCTGCTTGAAAACCTTAACGGAGACCTGCCGATCGCGAGAAAGAAGTCGCTGCAGAGATTTCTTGAAAAGCGCAAGGAGAGGGTGACTCCGGCGTCGCCGTATGCGATGGGTCAATGCGTGGCGGAGAAGAAGTTAAGGGAGTCGGTCCGAGACTCGGAGCCTAAGATGGATAAGCCTCGTCTCTGTCTACATGGATTTCCGACTAACTTTATTGACCCTATTGCATAG 747 0.4712 MSRATVELDFFGMEKENSSKSQFQRLLEQRRTVRGIQSAISKINPQLLKTVINSGGTTGNSDGGFLKQETFSRPNGALLTSDDPFSVPSTPEGNQNFLSSVRSVPAFSGASESPPGTPTAPLTIFYNGTISVFDVSHDKAEIIMKFAEKGNSKSAESMNSKLGIFSSSSDELNLLENLNGDLPIARKKSLQRFLEKRKERVTPASPYAMGQCVAEKKLRESVRDSEPKMDKPRLCLHGFPTNFIDPIA* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00113 248 ProSiteProfiles Tify domain profile. 115 149 IPR010399 -
Eupl11g00113 248 SMART tify_2 115 149 IPR010399 -
Eupl11g00113 248 Pfam Jas motif 183 207 IPR018467 -
Eupl11g00113 248 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 53 216 IPR040390 -
Eupl11g00113 248 Pfam tify domain 119 147 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00113 Eupl-Chr11 1560398 1564516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00113 1 200 Tify Gene Family AT5G13220 39.224 3.65e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Eupl11g00113 tify 3.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00113 K13464 - nnu:104591817 219.935