Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00110 ATGACCATGGTTCCTCCTCAAAACCTCTTTAAACAACAACAACAACAGTACGACGGTTATGGCGGTTGTGGAGACAGTTACGCGGGGAGTGTTGGTCTTATGAAGCGAATAGGGGGGTATGAGTATTGTAGCGACGGTTGGTTAGGATCTGATTTGGTGGTTGATCACATGGCTGAAGATGAGTCGAGAACCAGTAGCGTAAATGAAGCGGGCTCAAGCTCAAAAGACATCCAAGAAGAGAGAGATGAGAGGTGGCTTCAATTGGGTCTTGGTGGTTATTCCACCGGTCCAGATCATCAGCTCAAGCTCAATCCGATCAATCAGACGGTACGAAGAGGTGGATTGGTCGAACTCGATCTCTTACCCAGTGGTAACCCACAACATGTAAAGCCATTAGCAACCCCCATCTTCCATATGACCGACTTCCGTGCTCCGTCACCGGCTACAAATACTACTACGACTACACCTAATTTGTTCTTTCAACACCCGGCAGGAACAAGTTTAAGTTTTCCTCAGCCTGAACTCATGACATGGGGATATAGACCTAACCCATGGAATCTGACAGCAGCTGCTTCTTCTTCTTCTTCGCTGCTTCCCGGCCCATATTATCCGCGACCATATCAGCACCAAACCTTAGATATCGCCTATCCTAGCTCAGTCGTTGATGCTCCTTCCAGACCGCATTCCGGAATTTGGTTTGTTCTCCAAGCATCGCAAAATCAAGCAAAGGAACCCTTTCTGCCTCAGATACCCAAGAGCTACCTGAGAATCAAAGATGGGAAGATGACAGTTGGACTATTGATGAAGTATCTGGTTAACAAACTGAGACTGAATAGCGAATCAGAGATAGAGATAAGATGTAGAGGTGAAGAACTTGTACCAATGTTGACATTGCAACATGTTCGAGATAACATATGGAGTTCAAGGGATGCGGTGACTTTGCTTCCAGACTCCTCAACCACAGATCATGTCATGATTCTACATTACGGTAGGACCGCTTAA 1002 0.4621 MTMVPPQNLFKQQQQQYDGYGGCGDSYAGSVGLMKRIGGYEYCSDGWLGSDLVVDHMAEDESRTSSVNEAGSSSKDIQEERDERWLQLGLGGYSTGPDHQLKLNPINQTVRRGGLVELDLLPSGNPQHVKPLATPIFHMTDFRAPSPATNTTTTTPNLFFQHPAGTSLSFPQPELMTWGYRPNPWNLTAAASSSSSLLPGPYYPRPYQHQTLDIAYPSSVVDAPSRPHSGIWFVLQASQNQAKEPFLPQIPKSYLRIKDGKMTVGLLMKYLVNKLRLNSESEIEIRCRGEELVPMLTLQHVRDNIWSSRDAVTLLPDSSTTDHVMILHYGRTA* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00110 333 PANTHER RING FINGER PROTEIN 1 332 IPR044171 GO:0007275
Eupl11g00110 333 Gene3D - 214 329 - -
Eupl11g00110 333 MobiDBLite consensus disorder prediction 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00110 Eupl-Chr11 1481933 1488894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00110 244 330 C3H Transcription Factor Family AT3G23060 38.298 3.14e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00110 - - tcc:18608866 368.622