Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00108 ATGACGGAGCAACCGTTTCAGGAAACCGAGGCGTTTGTGACAATGGCAGGTGTTCCCGGAAGACAGAGCGTTGTCACAATGCAGGGAGACAAAAGCCACGACGACTCCGATCGGAACGGAGTGAGTCGTCACCTTGTTGCCGATGGGTTTCGTGGCGCGACGAGTTTCGGAGCCAGTCGGAAGAAACGGATGCCGAGGCAGCGGCGTATCAGCATCAACTCCTTGCTTTTCGCACCATCCTCTACCTCCCACGAGCAAACCTTGCCTGTCGACGTCCAGCCCACTCCGCACGTGCAAAGCTTGCTTCACTCTGAAATTGAACTGAGGAGGTTGAGATTCCTTCTCCAAAAGGAGCTCAAGCACAGTGATGTGAGTTCCCTCGGGAGAATGGTACTCCCAAAGAGAGCAGCAGAATCATTCCTACCTGCCCTTAATGCAAAGGAGGGGGTCTTTATCAGCATGGATGATATGGATGGTCTGCGAGTATGGAGCTTTAAGTACAGATTTTGGCCAAATAACAATAGCCGAATGTATATCCTTGAGAATACAGGGGAGTTCGTTAGGACACACGGCTTACAAATTGGAGACTTTATAATGCTGTACAAAGATGATCAAAACCAAAAATACATCATTCGGGCTAGAAAGGCTTCAGATCAAGATATTTTTTCTGATTATACAAGGAACGGCTTCTTTGGTGCCAACACTCGACTTGTTCCAGATTTCGAGGTAAATAAATCAAGTTACTTCCACGTAAATTACCCCTCAATGGATGATATTGGCATGTCGTTCTTGTTCGACAACACATTCCCGGATGACTTTCGGGCAGACTTTCATGAAACGGTGGAATTTGCGAGGCTTGAACCATTGACAAGTTTTGGAACTGTTGAGAACTTGTCTCTTGACGACTTCCCGTGA 915 0.4754 MTEQPFQETEAFVTMAGVPGRQSVVTMQGDKSHDDSDRNGVSRHLVADGFRGATSFGASRKKRMPRQRRISINSLLFAPSSTSHEQTLPVDVQPTPHVQSLLHSEIELRRLRFLLQKELKHSDVSSLGRMVLPKRAAESFLPALNAKEGVFISMDDMDGLRVWSFKYRFWPNNNSRMYILENTGEFVRTHGLQIGDFIMLYKDDQNQKYIIRARKASDQDIFSDYTRNGFFGANTRLVPDFEVNKSSYFHVNYPSMDDIGMSFLFDNTFPDDFRADFHETVEFARLEPLTSFGTVENLSLDDFP* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00108 304 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 44 221 IPR044800 GO:0003700
Eupl11g00108 304 ProSiteProfiles B3 DNA-binding domain profile. 115 217 IPR003340 GO:0003677
Eupl11g00108 304 SMART B3_2 115 217 IPR003340 GO:0003677
Eupl11g00108 304 CDD B3_DNA 113 215 IPR003340 GO:0003677
Eupl11g00108 304 SUPERFAMILY DNA-binding pseudobarrel domain 114 212 IPR015300 -
Eupl11g00108 304 Gene3D - 111 228 IPR015300 -
Eupl11g00108 304 FunFam B3 domain-containing transcription factor FUS3 111 225 - -
Eupl11g00108 304 Pfam B3 DNA binding domain 116 215 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00108 Eupl-Chr11 1455954 1461335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00108 60 303 B3 DNA Binding Superfamily AT3G26790 44.286 6.48e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Eupl11g00108 B3 7.1e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00108 K09287 - nnu:104591824 371.703