Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00106 ATGGCGGCCACGACGAGATATTGGGTGGTTTCTCTTCCGGTTCAAACCTCCGCTTCGTCTCTCTGGAGTCGTTTGCGGGAAGCGATCTCGAAGCATTCCTTCGATACTCCTCTCTACAGGTTCAATACGCCCGATCTCCGTGTTGGAACTCTAGATTCTCTTCTATCTCTCAGTGACGATCTTTTGAAGTCAAATAGCTTTGTTGAAGGAATATCGCACAAGATAAGACGTCAGATCGAGGAATTAGAGCGGGTTTCGGGTGTTGAGAGCAGTGCTCTGACGGTCGATGGAGTTCCCGTTGATTCCTACCTCACAAGATTTGCATGGGATGAAGCGAAGTATCCGACGATGTCTCCTCTCAGGGAGATTGTGGACAATATTCACGTTCAAGTAGCCAAGATTGAGGATGATCTCAAGGTTCGTGTTGCCGAGTATAACAATGTGCGCAGTCAGCTTAATATAATAAACAGAAAGCAAAGTGGAAGTTTAGCCGTTCGGGATCTTTCCAATTTAGTAAAGCCAGAGGATATTACTTCGTCAGAACATTTAGTGACGCTTCTTGCAGTTGTTCCCATGTATTCACAGAAGGATTGGCTGTCAAGCTATGAAACACTGACCTCCTATGTGGTTCCCAGGTCCTCTAAGAAGTTGATTGAGGACAATGAATATGCCTTATACACTGTAACACTATTTGGACGAGTGGCTGACAACTTCAAAACAAGTGCACGTGAAAGAGGATTTCAGATTCGTGATTTTGAATATAGTCCAGAAGCACAAGAGAGTCGCAAGCAAGAGTTAGAAAGCTTGATGCAAGATCAGGGGACCTTGAGAAGCTCTCTTCTGCAGTGGTGCTATACCAGTTATGGGGAGGTTTTCAGTGCCTGGATGCATTTCTGTGCTGTACGTGTCTTTGCAGAGAGCATTCTAAGATATGGCTTGCCCCCATCTTTCCTGGCAGTAGTATTGGCTCCATCTGTGAAAAGTGAGAAGAAAGTACGTTCTATCCTTGAAGGGTTGTGTGACAGCGCAAATAGCACCTACTGGAAATCCGAAGATGAAGTCGGAGGGATGGCTGGTCTAGGAGGCGAAGCTGATGGTCACCCGTATGTGTCCTTCACTATCAATTTTATTTGA 1134 0.4559 MAATTRYWVVSLPVQTSASSLWSRLREAISKHSFDTPLYRFNTPDLRVGTLDSLLSLSDDLLKSNSFVEGISHKIRRQIEELERVSGVESSALTVDGVPVDSYLTRFAWDEAKYPTMSPLREIVDNIHVQVAKIEDDLKVRVAEYNNVRSQLNIINRKQSGSLAVRDLSNLVKPEDITSSEHLVTLLAVVPMYSQKDWLSSYETLTSYVVPRSSKKLIEDNEYALYTVTLFGRVADNFKTSARERGFQIRDFEYSPEAQESRKQELESLMQDQGTLRSSLLQWCYTSYGEVFSAWMHFCAVRVFAESILRYGLPPSFLAVVLAPSVKSEKKVRSILEGLCDSANSTYWKSEDEVGGMAGLGGEADGHPYVSFTINFI* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00106 377 CDD V-ATPase_C 7 374 IPR004907 GO:0033180|GO:0046961|GO:1902600
Eupl11g00106 377 Gene3D Vacuolar atp synthase subunit c; domain 1 8 336 - -
Eupl11g00106 377 FunFam V-type proton ATPase subunit C 165 253 - -
Eupl11g00106 377 Gene3D - 165 253 - -
Eupl11g00106 377 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 5 376 IPR004907 GO:0033180|GO:0046961|GO:1902600
Eupl11g00106 377 Gene3D - 43 314 - -
Eupl11g00106 377 SUPERFAMILY Vacuolar ATP synthase subunit C 2 375 IPR036132 GO:0015078|GO:0033180|GO:1902600
Eupl11g00106 377 Pfam V-ATPase subunit C 7 370 IPR004907 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00106 Eupl-Chr11 1430927 1437966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00106 4 376 Primary Pumps ATPases(2) AT1G12840 82.842 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00106 K02148 - cave:132180310 658.677