Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00097 ATGCATTCTCTATCATGGAAAACCATGGCAATGGCTGTAGTACTTCTTCATCTATGCTTTTACATGGAGGTAGAGTCCTCATTATCTCTATTTGACAAGATTACTGAGTTGCCTGGGCAACCCCAGGTCAGCTTCCAGCAGTTTTCAGGCTATGTAACTGTGGATGAGAAGAAACAGAGAGCTCTGTTTTACTACTTTGTTGAAGCTGAGATAGATCCAACTTCAAAACCTCTTGTTCTTTGGTTGAATGGAGGTCCCGGTTGTTCTTCTCTGGGAGTTGGAGCACTCTCTGAAAATGGGCCTTTTAGACCAAGTGGAGAGGTTTTGGTCAGGAATGAGTATAGCTGGAACAGAGAAGCAAATATGTTATACTTAGAAACACCAGTAGGAGTTGGGTTCTCTTATTCCACCGATACCTCCTCTTATGTTGCTGTGGATGACAAGATAACAGCCAGGGACAATCTCGTGTTCTTGCAACGCTGGTTCATCAAGTTTCCACAATACAAGAACAGAGAACTGTTTTTAGCAGGGGAAAGCTATGCAGGTCACTATGTTCCGCAACTGGCAGACCTTATGATTCAATTCAACAAGAAGGAGAAGTTGTTTAATCTGAAAGGGATTGCTTTGGGTAATCCAGTTCTAGAATTTGCAACCGACTTCAATTCGAGGGCCGAGTACTTCTGGTCTCATGGGTTGATATCAGATTCCACATACCGAATTTTCACCTCTGCGTGTAACTATTCTCGGTATGTAAGTGAGTACTATAGAGACTCGGTTTCCCCTGTTTGTTCAAGGGTGATGAGCCAAGTGAATAAAGAAACCAGTAGATTTGTAGACAAGTATGACGTAACCCTTGACGTCTGTATATCTTCAGTCCTCTCGCAATCTAAGGTTATCAGTCCCCATCAAGTTACTGAGAGCATAGATGTCTGTGTGGAAGATGAAACTGTGAATTATTTAAACCGGCGGGATGTGCAGAAGGCTCTCCATGCCCGTCTTGTAGGAGTCAACAGATGGGCAGTTTGCAGCAATATCCTGGATTATGAGCTGCTTAATCTGGAGATACCTACAATTTCTGTTGTGGGCTCACTTGTCAAGGCTGGAATCCCAGTCTTGGTTTACAGTGGAGATCAAGATTCTGTTATCCCATTGACTGGGAGTCGGACGCTGGTCCATGGACTTGCAAAAAAGTTAGGACTGGTCATAACTGTACCTTACAGAGTTTGGTTTGAGGGAAAGCAGGTTGGTGGATGGACTCAAGTGTATGGTAATATCCTTTCATTTGCCACTATCAGAGGAGCTTCTCATGAAGCTCCCTTCTCTCAGCCAGAGAGATCGCTCGTGCTGTTCAAGGCATTTCTGGAAGGCAGGCCTCTACCAGAAATGTTCTGA 1392 0.4411 MHSLSWKTMAMAVVLLHLCFYMEVESSLSLFDKITELPGQPQVSFQQFSGYVTVDEKKQRALFYYFVEAEIDPTSKPLVLWLNGGPGCSSLGVGALSENGPFRPSGEVLVRNEYSWNREANMLYLETPVGVGFSYSTDTSSYVAVDDKITARDNLVFLQRWFIKFPQYKNRELFLAGESYAGHYVPQLADLMIQFNKKEKLFNLKGIALGNPVLEFATDFNSRAEYFWSHGLISDSTYRIFTSACNYSRYVSEYYRDSVSPVCSRVMSQVNKETSRFVDKYDVTLDVCISSVLSQSKVISPHQVTESIDVCVEDETVNYLNRRDVQKALHARLVGVNRWAVCSNILDYELLNLEIPTISVVGSLVKAGIPVLVYSGDQDSVIPLTGSRTLVHGLAKKLGLVITVPYRVWFEGKQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKAFLEGRPLPEMF* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00097 463 Gene3D - 358 456 - -
Eupl11g00097 463 SUPERFAMILY alpha/beta-Hydrolases 34 460 IPR029058 -
Eupl11g00097 463 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Eupl11g00097 463 ProSitePatterns Serine carboxypeptidases, histidine active site. 426 443 IPR033124 GO:0004185
Eupl11g00097 463 FunFam Carboxypeptidase 357 456 - -
Eupl11g00097 463 Pfam Serine carboxypeptidase 38 456 IPR001563 GO:0004185|GO:0006508
Eupl11g00097 463 Gene3D alpha/beta hydrolase 30 290 IPR029058 -
Eupl11g00097 463 Gene3D - 311 347 - -
Eupl11g00097 463 FunFam Carboxypeptidase 27 460 - -
Eupl11g00097 463 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 443 IPR001563 GO:0004185|GO:0006508
Eupl11g00097 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Eupl11g00097 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 426 439 IPR001563 GO:0004185|GO:0006508
Eupl11g00097 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Eupl11g00097 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00097 Eupl-Chr11 1316657 1321239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00097 319 459 Calmodulin-binding Proteins AT2G22960 27.660 8.22e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00097 K16297 - nnu:104591835 840.106