Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00090 ATGCTGTCGAGGGTTAATGGCGTCGTTTGGATGGAAGAAGATGGAGAGGAAGAAGACGCGGCTTCATGGACGAGGAACAACGTTGGTGAAGAGAACAAGGACGAGATGGGTTCTCTCTCGACTTTCAAATCGATGTTCGGAGAAGACTGGTATGTGAACAGTAATGGAAGCCACCCATCTCACCACGACTTCCAGAGCATCCAAAGCCACCAAGAAATCAAAGACATTACCTTTTCTTCGAACCCCACTGTAGCAGAGAGTCTGCTCTTGCCGCCAGTCGACTCGTCAACTTCGTGCTCTCCGTCTTCAGTCTTCAATCTCGACCAGTCGCAGCTGCAATCGCTCTTCCCTCCCAAATCTTGCTTGTCTTCGCTCCTCAACGTCGTCTGCAGCTACCCATTTGATAACGGTTTCGACTTGGGTTGCGACCCGGGGTTTCTCGCGCAGTTACAGGGGAACCAGACTTCGAATTCCTCTGTTTTAATGAACAGGGGAGGAGGGATTTTGACGGGGTTCAGCGGTTTGAGCTCGCAGGACCAGATAGATACTTCTGATCTGACCTCTAATTCCGAATTCCTGACTACCCGTTTGATGCCGTTACCCGACAACGGTGGCACTGTGGGCACTGGCTTCAATCCAACTAGTTTCGGGGGTTTCGAGGATTCTGAGAATTCTTTGTTCCTCAACAGGTCTAAGTTGTTGAGGCCTCTTGATATTTGCCCCCCCGTTGGTACGCAACCCACTCTCTTTCAGAAGAGAGCCGCCGCTCTCCTTCAGAATTCAGCCGCAGCGGACAAGGGGGGCAATTTGGGGTTTCTGGGTTCGGATATTGGTCAGATTTCGAAAATGGTCGAGGGTAATAAGGGAAAGAGGGAGTTGGAAGAAGAACAGGAGAAGAGGAGGAAGAACAACGAGGAGGATGAGATGGACGAGGGAAGCATTGACGGGTCGGGTTTGAATTATGATTCCGATGAGGCTACAGAGAATAATAAGGGGGAGGAGAGCGCGAAGAACGGTGGGAACAATTCGAACGCGAATAGCACTGTCACTGGTGGAGATCAAAAGGGAAAGAAGAAGGGACTTCCAGCGAAAAATCTGATGGCCGAGAGACGACGGAGGAAGAAGCTCAATGACAGGCTTTACATGCTGAGGTCTGTCGTTCCGAAGATTAGCAAGATGGATAGAGCTTCGATACTGGGGGATGCGATTGAGTACTTGAAGGAGCTTCTGCAAAGGATCAATGACCTCAATTTTGAACTAGAGTCTACCCCTCCTGGTTCTTTGCTGCCACCTACTACAAGCTTCCACCCTTTGACGCCCACCCCACCCACTCTGCCCTGCCGTGTCAAGGAGGAACTCTCCCCGAGTCCATTGCCGAGCCCAAATAACCAACCTGCAAGGGTTGAAGTCAGGTTAAGAGAAGGGAGAGCTGTCAATATCCACATGTTTTGTGCCCGCAGACCAGGTCTCTTGCTCTCCACCATGAAGGCTCTTGATGGCCTTGGGCTAGACATCCAGCAAGCTGTCATCAGCTGTTTTGATGGCTTTGCTTTGGATGTTTTCCGAGCTGAGCAATGCAAGGAAGGTCTGGACATCCCGCCTGAGGAAATCAAAGCAATACTCTTGAATTCAGCCGGCTTCCACAGTACGATGTAG 1656 0.5072 MLSRVNGVVWMEEDGEEEDAASWTRNNVGEENKDEMGSLSTFKSMFGEDWYVNSNGSHPSHHDFQSIQSHQEIKDITFSSNPTVAESLLLPPVDSSTSCSPSSVFNLDQSQLQSLFPPKSCLSSLLNVVCSYPFDNGFDLGCDPGFLAQLQGNQTSNSSVLMNRGGGILTGFSGLSSQDQIDTSDLTSNSEFLTTRLMPLPDNGGTVGTGFNPTSFGGFEDSENSLFLNRSKLLRPLDICPPVGTQPTLFQKRAAALLQNSAAADKGGNLGFLGSDIGQISKMVEGNKGKRELEEEQEKRRKNNEEDEMDEGSIDGSGLNYDSDEATENNKGEESAKNGGNNSNANSTVTGGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLNFELESTPPGSLLPPTTSFHPLTPTPPTLPCRVKEELSPSPLPSPNNQPARVEVRLREGRAVNIHMFCARRPGLLLSTMKALDGLGLDIQQAVISCFDGFALDVFRAEQCKEGLDIPPEEIKAILLNSAGFHSTM* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00090 551 Coils Coil 290 310 - -
Eupl11g00090 551 MobiDBLite consensus disorder prediction 333 353 - -
Eupl11g00090 551 MobiDBLite consensus disorder prediction 285 308 - -
Eupl11g00090 551 MobiDBLite consensus disorder prediction 284 368 - -
Eupl11g00090 551 MobiDBLite consensus disorder prediction 1 34 - -
Eupl11g00090 551 CDD ACT_UUR-ACR-like 480 540 - -
Eupl11g00090 551 Gene3D - 354 423 IPR036638 GO:0046983
Eupl11g00090 551 FunFam BHLH transcription factor 356 424 - -
Eupl11g00090 551 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 363 430 IPR036638 GO:0046983
Eupl11g00090 551 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 360 409 IPR011598 GO:0046983
Eupl11g00090 551 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 276 548 - -
Eupl11g00090 551 Pfam Helix-loop-helix DNA-binding domain 367 409 IPR011598 GO:0046983
Eupl11g00090 551 CDD bHLH_AtAMS_like 363 430 - -
Eupl11g00090 551 SMART finulus 366 415 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00090 Eupl-Chr11 1201978 1206159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00090 22 524 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 52.055 2.41e-129 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl11g00090 HLH 2.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00090 - - nnu:104591842 786.178