Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00083 ATGGACGTGCAACCACTTCATAGCTTAGATTTATCTGATAAGCCTCACATGAACGGTTTGAACAATGGCTTCGGTTCTAAAATGGTTAATGATTGTCATAATTCGATGGCATCTGGATTTTCTCCGACCGACGCCGAAATGGAAGGCAAAGCAGCTGTTGTTACGGTGACGGACGTTTCACAGTGCGTTCAGAAGATTGTCTCGGAGGAAGCTTTTGTGAGGAGGGTTAGCGCGAGGCTCCAGAACAGACCCGAGAAGAAGAGATATTGTTATGTTGCTCCCTCGTCAAATACCGAGAAAGACAAAGTTAGCAAGAAGAAGGCTAAAGTTTACGAGAGAAGAAATGGAAATCTAGCGAATTTGAGCGACAAAGAGGCTGAAGAGAACGATTGTAAAATTCCTATGGCGACATCTCCCAACGAGGCGATGGGTTTTGCCGATGTTGATTGTGGTGATTCGGTGAATCTAGGTTCAAATGAGGTTGAGGGGAAAGGGACAGTTAGCGGCAGTAATTCAGCCGATGTAGTAGGGAAGAGCGCCTATGCCAGGGTGAAGGAGACATTGAGGGTTTTTAATACACATTACCTTCACTTCGTTCAGGAAGAGGAGAATAGGTGCAAAAAAGTAGAAGTTAATGATCAGAAAACTCCCAAAGGTTCAAAATCTAAGAAAGGGAATGCATGTGCAGAGGATGCTAAACGATCTTCCAAAAGACCTGATCTGAAGGCAATAACCAAGATGATTGAGACTAGGGCTATTTTGTACCCCAAAAAAAGATTTGGTCACCTTCCGGGCGTTGATGTTGGGCATCAATTCTTTTCAAGGGCTGAAATGGTTGCTATAGGTTTTCATGGTCACTGGCTGAATGGAATTGATTACATGGGAGCTTCCTACAAAAAATGGGAGGAGTACAAAGGCTACACATTCCCACTTGCAGTATCAATTGTGTTATCAGGCCAGTATGAAGATGATGTGGATAACTCGGAAGATGTTGTGTACACTGGTCAAGGTGGAAATAATTTGCTCGGTGATAAGCGTCAAGTCAGGGATCAAGTGATGATTCGTGGTAATTTGGCACTTAAGAATAGCATAGAGCAATGTGTGCCTGTAAGAGTAATTCGTGGGCATGAATCTGCAAGTAGTTACTGTGGCAAGGTTTACACGTTTGATGGCTTGTACAAGGTTGTTCAATATTGGGCAGAGAAAGGTGTTTCTGGATTTACTGTTTTTAAGTATCGCCTAAGGCGGCTTGAAGGCCAGCCCATATTGACCACCAACCAGGTTCATTTCAGTCGAGCACATGCACAAAGGTCTCTTTCCCAATTACGTGGGTTGGTATGCAAGGACATTAGTGGTGGGCAAGAGGACATTCCTATTCCAGCGACCAATTTGGTTGATGATCCACCTGTTGCACCCATGGGTTATTCATATTGCAAGTCTATTGGAGTTGCGGAAAATGTGAAGCTCCCCATCAGTGCCATTGGCTGCAATTGCAGAGGAACCTGTATTGATCCTAGGATTTGTGCTTGTGCAAGACTTAATGGCTCTGACTTTCCATATGTGCGTAGAGATGGCGGCAGATTGGTTAAAGCCAAAGATGTTGTGTTTGAATGTGGACCAAACTGTGGCTGTGGACCTGGTTGTGTCAACCGAACATCTCAGCATGGATTGAAGTACCGATTTGAGGTCTTCCGTACGCCAAACAAAGGATGGGCTGTAAGATCTTGGGACTATATTCCTTCTGGGGCACCTGTATGTGAATACACGGGAAATCTTATGAGGACCGATGAATTAGATAATGTTTCTGAGAATAACTTCATTTTTGATATTGATTGCTTGCAAACAATGAAGGGGCTTGACGGAAGAGAGAGGCGATTAGGAGATGTAGCTATGCCTACCAATACTCATCTGGATAAAACTGATGACAAGAAATTGGAAACTGCGCCAGAGTTCTGTATTGATGCAGGCTCAGTTGGTAATATTGCCAGATTCATCAATCATAGTTGTCAGCCTAATCTTTTCGTCCAGTGTGTTTTGAGCTCACACCATGATATAAAACTTGCTCGAGTAATGCTGTTTGCCGCCGACAACATACCTCCCCTACAGGAGCTTACATATGACTATGGGTACGCTCTAGATAGTGTCATGGGTCCGGATGGCGAGATTAAAAAAATGCAATGCTACTGTGGTGCAGCAGACTGTCGGAAGCGTTTGTATTAA 2220 0.4396 MDVQPLHSLDLSDKPHMNGLNNGFGSKMVNDCHNSMASGFSPTDAEMEGKAAVVTVTDVSQCVQKIVSEEAFVRRVSARLQNRPEKKRYCYVAPSSNTEKDKVSKKKAKVYERRNGNLANLSDKEAEENDCKIPMATSPNEAMGFADVDCGDSVNLGSNEVEGKGTVSGSNSADVVGKSAYARVKETLRVFNTHYLHFVQEEENRCKKVEVNDQKTPKGSKSKKGNACAEDAKRSSKRPDLKAITKMIETRAILYPKKRFGHLPGVDVGHQFFSRAEMVAIGFHGHWLNGIDYMGASYKKWEEYKGYTFPLAVSIVLSGQYEDDVDNSEDVVYTGQGGNNLLGDKRQVRDQVMIRGNLALKNSIEQCVPVRVIRGHESASSYCGKVYTFDGLYKVVQYWAEKGVSGFTVFKYRLRRLEGQPILTTNQVHFSRAHAQRSLSQLRGLVCKDISGGQEDIPIPATNLVDDPPVAPMGYSYCKSIGVAENVKLPISAIGCNCRGTCIDPRICACARLNGSDFPYVRRDGGRLVKAKDVVFECGPNCGCGPGCVNRTSQHGLKYRFEVFRTPNKGWAVRSWDYIPSGAPVCEYTGNLMRTDELDNVSENNFIFDIDCLQTMKGLDGRERRLGDVAMPTNTHLDKTDDKKLETAPEFCIDAGSVGNIARFINHSCQPNLFVQCVLSSHHDIKLARVMLFAADNIPPLQELTYDYGYALDSVMGPDGEIKKMQCYCGAADCRKRLY* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00083 739 SMART set_7 559 715 IPR001214 GO:0005515
Eupl11g00083 739 SMART G9a_1 256 420 IPR003105 -
Eupl11g00083 739 SMART preset_2 447 543 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Eupl11g00083 739 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 90 739 IPR025794 GO:0016571
Eupl11g00083 739 ProSiteProfiles Pre-SET domain profile. 494 556 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Eupl11g00083 739 ProSiteProfiles Post-SET domain profile. 723 739 IPR003616 -
Eupl11g00083 739 SMART PostSET_3 723 739 IPR003616 -
Eupl11g00083 739 ProSiteProfiles SET domain profile. 559 709 IPR001214 GO:0005515
Eupl11g00083 739 SUPERFAMILY SET domain 443 716 IPR046341 -
Eupl11g00083 739 SUPERFAMILY PUA domain-like 243 432 IPR015947 -
Eupl11g00083 739 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 78 732 - -
Eupl11g00083 739 Gene3D - 244 439 IPR036987 -
Eupl11g00083 739 Pfam Pre-SET motif 451 551 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Eupl11g00083 739 Gene3D SET domain 440 739 IPR046341 -
Eupl11g00083 739 ProSiteProfiles YDG domain profile. 261 416 IPR003105 -
Eupl11g00083 739 Pfam SAD/SRA domain 259 420 IPR003105 -
Eupl11g00083 739 MobiDBLite consensus disorder prediction 212 234 - -
Eupl11g00083 739 Pfam SET domain 570 709 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00083 Eupl-Chr11 1060040 1086376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00083 247 739 EF-hand Containing Proteins AT5G13960 65.587 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl11g00083 SAD_SRA 1.4e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00083 K11420 - nnu:104591863 1062.37