Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00081 ATGGCGCTCGAACGTTTAAGTCCTACACCGGCGCCGGTTGACGGAAACTCTAAAGCCATCCCTCTTTTTAACGGCGTTGACGGCGCCGATGACGGAAATAGAGCGCCGAGACTCCCTCGTTGGACGAGACAAGAGATACTCGTCCTCATACAGGGAAAGAAAGTTGCAGAGAACCGGGTTCGAAGAGGACGAGCCGCCGGTTCGGCCTTTGGTACGAACATGCTGGAACCCAAATGGGCTTCGGTCTCTTCGTACTGCAAACGGCACGGTGTGAACCGGGGACCGGTTCAGTGCCGGAAACGATGGAGTAACCTCGCCGGAGATTTCAAGAAAATCAAAGAATGGGAGTCGCAGATAAGCGAAGAGGCCGAGTCGTTCTGGGTCATGAGAAACGATTTGAGGAGAGAGAGGAAATTGCCGGGTTTCTTCGATAGAGAAGTATATGATATATTGGACGGCGGGAATGTAACGGCGACGGAGACGGTGATGGTGACGGCGGATGTGAAGGACAACGAAGGAGTAGTATCGGTGACGGAGGATGAGGAGGCGGTGTTCGATAGTGCTAGAACAGGTGCAGCGGATGATGGGTTGTTTTCGGATTTCGAACAGTCGAAGCAGGAGGAGACGGGCGGGAGCCCGGACAAGGAGATGGCCACGGAGAGCCCCACGAAGACTCTCCCAGCTCCGCTGCCGATTTCGGAGAAGCAATTCCAACCAATTTGCAAAGGGTGTTTAGATCAAGGTATGATAAATGACAAGCAGCCTGTGTTAAATCCTGAGAAGGGATCAACATCCCAAGAGGGACATAAGCGGAGACGGTTGTCGTCAGACGAAGGTGGGGACATCAGTGTGCAGGATCAGTTGATCAAAGTCTTGGAGAGGAACAGTAAAATGCTGACAGCCCAACTTGATGCCCATAACATCAATTGCCAATTGGATAGGGACCAACGGAAAGACCATGCTGACAGCTTAGTCTCTGTTCTTAGCAAGCTTGCAGATGCTCTTGGAAGAATAGCAGATAAATTATAG 1029 0.517 MALERLSPTPAPVDGNSKAIPLFNGVDGADDGNRAPRLPRWTRQEILVLIQGKKVAENRVRRGRAAGSAFGTNMLEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWESQISEEAESFWVMRNDLRRERKLPGFFDREVYDILDGGNVTATETVMVTADVKDNEGVVSVTEDEEAVFDSARTGAADDGLFSDFEQSKQEETGGSPDKEMATESPTKTLPAPLPISEKQFQPICKGCLDQGMINDKQPVLNPEKGSTSQEGHKRRRLSSDEGGDISVQDQLIKVLERNSKMLTAQLDAHNINCQLDRDQRKDHADSLVSVLSKLADALGRIADKL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00081 342 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 1 342 - -
Eupl11g00081 342 MobiDBLite consensus disorder prediction 264 279 - -
Eupl11g00081 342 MobiDBLite consensus disorder prediction 251 279 - -
Eupl11g00081 342 MobiDBLite consensus disorder prediction 204 230 - -
Eupl11g00081 342 Coils Coil 289 309 - -
Eupl11g00081 342 Pfam Myb/SANT-like DNA-binding domain 40 129 IPR044822 -
Eupl11g00081 342 MobiDBLite consensus disorder prediction 1 25 - -
Eupl11g00081 342 Gene3D - 41 111 - -
Eupl11g00081 342 ProSiteProfiles Myb-like domain profile. 40 106 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00081 Eupl-Chr11 1046519 1050736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00081 28 114 Trihelix Transcription Factor Family AT1G76890 30.337 2.40e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl11g00081 Myb_DNA-bind_4 3.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00081 - - nnu:104591861 534.643