Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00048 ATGTCAAGGAATCTTGCAGCAATACTTGGTAGTGCTGCAGGAGGCGTGGCATTGGTGGGGATTGTAATTATATTTTTATGGTTCTGCCTATCTCGGTACCGGAGCATTTCCAGAACTTCTGAGACAGGTTCCTCCGATCCATCCAGTCAAGTGGGAATAAACATTGGGGTTGAGTTGCCTTCAACAGGAGTTGAATCTCATCCACCTGGTTCACAAGCTAGGAGTTTCATGCTGGAAGAATTGGCTCTGGCTACAAAGGATTTCACTGATATATATTTGATCGGGGAAGGAAAATTCGGGAAGGTGTACAAGGGTTTTCTTCAGAATGGGATGATCGTGGCCATCAAAAAGCGGTCTGGTGCACCTAGTCAGGAATTTGTCGAAGAGGTACGCTATCTCTCATCTATTCGGCACCGAAATCTTGTGAGTCTTTTGGGTTATTGCCAGGAAAATGATCAACAAATGCTTATCTATGAGTATATACCCAATGAAAGTGTTTCCAGTCACTTATATGGTGCTGGTCAAGTCTCTGATGGGAAGCTAGAATTCAAGCATAGGCTTCCAATAGCTCTAGGGGCAGCCAAAGGTTTGGCTCACCTTCACTCCCTGACTCCTCCTTTGGTACATAAGAATTTCAAAACAGCCAATGTCCTTGTAGATGAAAATTTCATTGCTAAGGTTGCGGATGCAGGGCTCCGCAATTTAATTGGTAGACTTGATGTTGCTGGTCCATCCTCTCGAATGATGTCTGATGATATTTTTCTTGCTCCTGAGGTGAGAGAGTTCGGGAGGTTCTCAGAAAGAACTGACGTATACAGTTTTGGAGTATTCCTGCTGGAGTTAGTAAGTGGGCGAGAAGCTATGCAATCTCAGTCTTCAGAATCTGATCAAAGCTTGATCGAATGGGCCCAAACTTATCAGGACTCGAGTGATATTTCGGCAATCATTGATCGCCGACTGGGCAGCAGTTTCACGGATGAAAGCATGAAAGAGTTCATAGAGCTGACAGCCCGGTGTGTGGACTCCACTAGCCAGAGGCAGCCAACCATGAATTCTGTGGTATCAGAACTAGATCGGATACTCGAGAAAGAAATGAGCTTGACAACCATCATGGGGGAAGGCACCACTAATGTGATGCTTGCAAGCGAGCTTTTTACAGCTTCGTGA 1167 0.4524 MSRNLAAILGSAAGGVALVGIVIIFLWFCLSRYRSISRTSETGSSDPSSQVGINIGVELPSTGVESHPPGSQARSFMLEELALATKDFTDIYLIGEGKFGKVYKGFLQNGMIVAIKKRSGAPSQEFVEEVRYLSSIRHRNLVSLLGYCQENDQQMLIYEYIPNESVSSHLYGAGQVSDGKLEFKHRLPIALGAAKGLAHLHSLTPPLVHKNFKTANVLVDENFIAKVADAGLRNLIGRLDVAGPSSRMMSDDIFLAPEVREFGRFSERTDVYSFGVFLLELVSGREAMQSQSSESDQSLIEWAQTYQDSSDISAIIDRRLGSSFTDESMKEFIELTARCVDSTSQRQPTMNSVVSELDRILEKEMSLTTIMGEGTTNVMLASELFTAS* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00048 388 FunFam Protein kinase superfamily protein 161 374 - -
Eupl11g00048 388 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 15 365 IPR047117 -
Eupl11g00048 388 Pfam Protein tyrosine and serine/threonine kinase 94 357 IPR001245 GO:0004672|GO:0006468
Eupl11g00048 388 SUPERFAMILY Protein kinase-like (PK-like) 67 357 IPR011009 -
Eupl11g00048 388 Gene3D Transferase(Phosphotransferase) domain 1 161 378 - -
Eupl11g00048 388 ProSitePatterns Protein kinases ATP-binding region signature. 94 117 IPR017441 GO:0005524
Eupl11g00048 388 FunFam receptor-like protein kinase FERONIA 58 160 - -
Eupl11g00048 388 Gene3D Phosphorylase Kinase; domain 1 62 160 - -
Eupl11g00048 388 ProSiteProfiles Protein kinase domain profile. 88 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00048 Eupl-Chr11 667940 676010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00048 70 358 Trihelix Transcription Factor Family AT1G70460 40.404 4.29e-66 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Eupl11g00048 PK_Tyr_Ser-Thr 1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00048 - - ming:122078555 549.28