Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00007 ATGGGCACAACCAGAAACTCCATACTTGTCTACTACCTCCCTGGCTTCGTCTTTTATCTCATCAGTCTTGCTAGGGCACAAAAAGCACTTTGCCCTGCTGGTTGGGAAATTGGCCCAAATAAGAACAAGTGCTTTGGACATATATCAAGCTCCCATTCTTGGGATGGCTCAGAATCACTCTGTAAGAATTATCATGGTCACTTGGCAGCTCTGATTTCTGTTCAGGAACTAAGATTTGCCCAGAAACTATGTGGCGGAACTGTTAATGGCTGCTGGGTTGGAGGGAGAGGGTTCAATTCTACGGTTGGTTTCAGTTGGAAGTGGTCTGACGATATGTCGCAATGGAACGAGTCAATCTTCCCAGGAGCTCCATTTCACTCCAATTGCACCAATTCAACATGCCAAAACATTAATGCAATTGACTCGTGTATGTTGGTGACTCACGGCCCAGTCGCCCTCGTGGGTGAGAGATGCAACACATCCCACGAGTTAATATGCATGCTTGGTATAGAGAATAAATGTTACCACAAGCGCTGCCACAAGGAATATTTAATCATCCTTGCTATTGTTAGCGGGTTGATTCTTTGCACAACAATGGCTGTTGTGATCTGGCTCCTGGCATACAAGCGGAGCAAGAGACGCAGAAGGTCACGCAAAGTATCTAATCCTTCAACATCTGCATTAGTACCCCCATCATGGAAGGTCTTCACCAATGAGGAGCTGAGGTCAATTACAAAGAATTTTAGTGAAGGAAATCGGCTTCTTGGAGATGCCAAGACAGGCGGCACATACAGCGGGATTCTATCTGATGGATCAAGGGTAGCAGTCAAAAGGTTGAAGAGGTCTAGTTTTCAGAGGAAGAAGGAATTTTATTCTGAGATTGGAAGAGTTGCACGGCTTCATCATCCAAATCTTGTGGCTGTAAAAGGATGTTGCTATGATCATGGTGATCGTTATATTGTTTATGAGTTTGTTGCTAATGGGCCCTTGGATAGATGGCTACACCACATACCGAGGGGGGGTAGGAGCTTGGATTGGGCAATGAGAATGAGAGTTGCCACCTCTCTTGCTCAAGGAATTGCATTCCTGCATGACAAGGTGAAGCCACATGTGGTGCACCGGGATATTCGTGCCAGCAATGTACTGCTTGATGAAGAGTTTGGAGCACATCTAATGGGAGTGGGCCTATCAAAGTTTGTGCCATGGGAAGTGATGCACGAAAGGACAGTGATGGCAGGTACATACGGCTACCTAGCTCCGGAATTTGTGTACAGAAATGAGCTCACGACAAAGAGCGATGTTTATAGCTTCGGAGTGCTGCTGCTTGAAATTGTTAGTGGGCGTAGGCCCGCCCAGGCGGTTGATTCTGTGGGTTGGCAGAGTATATTCGAATGGGCCACACCACTGGTGCAGTCACACCAGTACCCAGGGCTCTTGGATCCACTCATCTCTGACATTCCCGAAGTTGGGGTCATACAAAAGGTGGTGGACCTTGTATATGCTTGCACACAGCATGTCCCATCGGTGCGGCCAAGAATGTCACATGTAGTCCATCAGCTGCAACAGTTGGGACTGAAAACTGCTTCTGAGAAGGCAAGAAGTGGCACAAGCACGAGTACCGCCTCTCGAATGTCTAATCTGGAGGTGGAGATCAATAGTTTCTAA 1665 0.4715 MGTTRNSILVYYLPGFVFYLISLARAQKALCPAGWEIGPNKNKCFGHISSSHSWDGSESLCKNYHGHLAALISVQELRFAQKLCGGTVNGCWVGGRGFNSTVGFSWKWSDDMSQWNESIFPGAPFHSNCTNSTCQNINAIDSCMLVTHGPVALVGERCNTSHELICMLGIENKCYHKRCHKEYLIILAIVSGLILCTTMAVVIWLLAYKRSKRRRRSRKVSNPSTSALVPPSWKVFTNEELRSITKNFSEGNRLLGDAKTGGTYSGILSDGSRVAVKRLKRSSFQRKKEFYSEIGRVARLHHPNLVAVKGCCYDHGDRYIVYEFVANGPLDRWLHHIPRGGRSLDWAMRMRVATSLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMHERTVMAGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQSHQYPGLLDPLISDIPEVGVIQKVVDLVYACTQHVPSVRPRMSHVVHQLQQLGLKTASEKARSGTSTSTASRMSNLEVEINSF* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00007 554 ProSitePatterns Tyrosine protein kinases specific active-site signature. 371 383 IPR008266 GO:0004672|GO:0006468
Eupl11g00007 554 FunFam C-type lectin receptor-like tyrosine-protein kinase 226 324 - -
Eupl11g00007 554 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 156 523 - -
Eupl11g00007 554 ProSiteProfiles C-type lectin domain profile. 40 167 IPR001304 -
Eupl11g00007 554 Gene3D - 21 169 IPR016186 -
Eupl11g00007 554 Gene3D Transferase(Phosphotransferase) domain 1 325 536 - -
Eupl11g00007 554 FunFam C-type lectin receptor-like tyrosine-protein kinase At1g52310 325 536 - -
Eupl11g00007 554 Gene3D Phosphorylase Kinase; domain 1 225 324 - -
Eupl11g00007 554 SUPERFAMILY C-type lectin-like 20 168 IPR016187 -
Eupl11g00007 554 SUPERFAMILY Protein kinase-like (PK-like) 221 520 IPR011009 -
Eupl11g00007 554 SMART CLECT_2 31 167 IPR001304 -
Eupl11g00007 554 SMART tyrkin_6 252 520 IPR020635 GO:0004713|GO:0006468
Eupl11g00007 554 Pfam Lectin C-type domain 51 167 IPR001304 -
Eupl11g00007 554 Pfam Protein tyrosine and serine/threonine kinase 253 520 IPR001245 GO:0004672|GO:0006468
Eupl11g00007 554 ProSiteProfiles Protein kinase domain profile. 249 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00007 Eupl-Chr11 139660 150211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00007 60 523 Receptor kinase-like Gene Family AT1G52310 71.489 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Eupl11g00007 PK_Tyr_Ser-Thr 1.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00007 - - nnu:104588599 949.118