Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00001 ATGGGTGTTTATAAGGCCGCGATCGGGGATGCTGTGATAACCTTCATGTGGGTCTTCTGCGTGTCGACGCTAGGGGCCTTCACATCCGTCATAGCATCGGCTCTGGGAGTCCAAGGGATGACCACGCTCCTGATCACCACCGTCCTCGTCTCCTTTCTCGTATTCGTATTCAACTTGCTCGGCAACGCCTTGGGTGGGGCCAGCTTTAATCCCACCGGCACTGCCGCCTTCTACGCCGCCGGTGTTGGACCTGACAACCTCATCTCCATGGCCTTCCGTTTCCCTGCTCAGGCAGTTGGGGCAGTGGGCGGTGCCCTGGCAATCATGGAAGTGATGCCTCTACAGTACAAACACATGCTGGGAGGACCTTCGTTGAAAGTTGATTTGCACACAGGGGCCATTGCTGAGGGAGTCTTGACCTTCATAATCAGCTTTGCTGTTCTTCTTATAGTCCTCAGGGGCCCGCACAGCCTACTATTGAAGACATGGCTGCTTTCCATGTCAACTGTTGCATTGGTTGTTGCAGGTTCTGCTTATACTGGACCATCCATGAATCCTGCCAATGCCTTTGGCTGGGCATATGTAAATAACCGCCACAATACTTGGGAGCAGTTCTATGTTTATTGGATTTGCCCCTTCATTGGAGCGATTCTAGCCGCATGGGTCTTCCGTGTTCTCTTACCTCCTCCAATTAAGCAGAAGAAAGCCTGA 711 0.526 MGVYKAAIGDAVITFMWVFCVSTLGAFTSVIASALGVQGMTTLLITTVLVSFLVFVFNLLGNALGGASFNPTGTAAFYAAGVGPDNLISMAFRFPAQAVGAVGGALAIMEVMPLQYKHMLGGPSLKVDLHTGAIAEGVLTFIISFAVLLIVLRGPHSLLLKTWLLSMSTVALVVAGSAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFIGAILAAWVFRVLLPPPIKQKKA* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00001 236 Gene3D Glycerol uptake facilitator protein. 2 235 IPR023271 -
Eupl11g00001 236 PRINTS Major intrinsic protein family signature 135 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl11g00001 236 PRINTS Major intrinsic protein family signature 166 188 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl11g00001 236 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl11g00001 236 PRINTS Major intrinsic protein family signature 89 108 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl11g00001 236 PRINTS Major intrinsic protein family signature 50 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl11g00001 236 PRINTS Major intrinsic protein family signature 206 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl11g00001 236 SUPERFAMILY Aquaporin-like 3 231 IPR023271 -
Eupl11g00001 236 PANTHER AQUAPORIN SIP1-1 1 235 IPR044222 GO:0015250
Eupl11g00001 236 FunFam Aquaporin SIP1-1 1 236 - -
Eupl11g00001 236 Pfam Major intrinsic protein 3 223 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00001 Eupl-Chr11 36287 44666 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00001 1 235 Major Intrinsic Protein MIP AT5G18290 54.812 3.97e-79 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00001 K09875 - nnu:104610137 388.652