Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01325 ATGTCGTCGGAACCTCCGCCGTTCCAGGAAGCCGAACGCTGCGACGTCTGCAAATGCAGTTTCAACGCCTTCAGACGACGGCACCATTGTCGATGTTGTGGCAGGACATTATGCCATGAACATTCATCATATCAAATGGCTATACCACAATTTGGCATTCATTCCAGTGTTAGAGTTTGCTCTGATTGCTTTAACAACACTAGATCTCGGGAAGATGATCCACAGGCTACTTTTAATGGCATTGATGCATTTTCAAGATTGGACGTCAGTGCGGATATCAATGCAAAGGCTGAATCGAATGCAGAGCAGCAGCACCCTGTTATAGATGTCCCAGATTGCAAATGCGGGATGCCTTTATGCATCTGTGAAGCTTCAGCTCCAGCTCCAGATCCAGCTCCCTTGCAGCAGATGCAAAGTGTTTCCACCTCCCCAGCTCAGCCCAACCTAAGACCAAAGAAGATGGACCACATTCCAAAGAATACAGGATCCTCTTCAAACAGCAAGCCTAGTTCTGTTTTCAATCTTGGTCAAATGACCAACGGAAGTTGGGATAAACCTCGGACAGATTATGAAGTTAATGGGGAGGGTTTAAGAGAAGCTATTAAGATTGGTGACACTACTGCAGTCAAAAAGCTTCTGAGTGAGGGTGTGGACGCAAATTACTGTGACAAACAAGGATTGTCTTTGTTACATTTGGCAGCACTCTTTAACCAGACTGAGATAGCCTTTGTTCTCATGGACTATGGAGCGAGTCTGGATTGTAAGAATCAACAAGGGGAAACACCATTGGATTGTGCTCCTACTATGTTGCAGTACAAAATGAGAAAGAAGATTGAAGAAGGTGCATAG 849 0.4511 MSSEPPPFQEAERCDVCKCSFNAFRRRHHCRCCGRTLCHEHSSYQMAIPQFGIHSSVRVCSDCFNNTRSREDDPQATFNGIDAFSRLDVSADINAKAESNAEQQHPVIDVPDCKCGMPLCICEASAPAPDPAPLQQMQSVSTSPAQPNLRPKKMDHIPKNTGSSSNSKPSSVFNLGQMTNGSWDKPRTDYEVNGEGLREAIKIGDTTAVKKLLSEGVDANYCDKQGLSLLHLAALFNQTEIAFVLMDYGASLDCKNQQGETPLDCAPTMLQYKMRKKIEEGA* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01325 282 Gene3D - 186 280 IPR036770 -
Eupl10g01325 282 ProSiteProfiles Ankyrin repeat region circular profile. 225 256 - -
Eupl10g01325 282 ProSiteProfiles Ankyrin repeat profile. 225 257 IPR002110 GO:0005515
Eupl10g01325 282 Pfam Ankyrin repeats (3 copies) 200 266 IPR002110 GO:0005515
Eupl10g01325 282 MobiDBLite consensus disorder prediction 131 187 - -
Eupl10g01325 282 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 27 2 281 - -
Eupl10g01325 282 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 72 IPR013083 -
Eupl10g01325 282 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 8 68 IPR017455 -
Eupl10g01325 282 CDD FYVE_scVPS27p_like 7 64 - -
Eupl10g01325 282 MobiDBLite consensus disorder prediction 132 148 - -
Eupl10g01325 282 MobiDBLite consensus disorder prediction 158 186 - -
Eupl10g01325 282 SUPERFAMILY Ankyrin repeat 198 269 IPR036770 -
Eupl10g01325 282 SUPERFAMILY FYVE/PHD zinc finger 8 74 IPR011011 -
Eupl10g01325 282 SMART fyve_4 2 69 IPR000306 GO:0046872
Eupl10g01325 282 Pfam FYVE zinc finger 9 67 IPR000306 GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01325 204 263 MAP Kinase Kinase Kinase AT4G18950 36.667 1.04e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01325 - - nnu:104590426 394.43